Rhodopseudomonas palustris DX-1: Rpdx1_0979
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Entry
Rpdx1_0979 CDS
T01381
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00071
Fatty acid degradation
rpx00280
Valine, leucine and isoleucine degradation
rpx00310
Lysine degradation
rpx00362
Benzoate degradation
rpx00380
Tryptophan metabolism
rpx00410
beta-Alanine metabolism
rpx00640
Propanoate metabolism
rpx00650
Butanoate metabolism
rpx00907
Pinene, camphor and geraniol degradation
rpx00930
Caprolactam degradation
rpx01100
Metabolic pathways
rpx01110
Biosynthesis of secondary metabolites
rpx01120
Microbial metabolism in diverse environments
rpx01200
Carbon metabolism
rpx01212
Fatty acid metabolism
Module
rpx_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Rpdx1_0979
00650 Butanoate metabolism
Rpdx1_0979
09103 Lipid metabolism
00071 Fatty acid degradation
Rpdx1_0979
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rpdx1_0979
00310 Lysine degradation
Rpdx1_0979
00380 Tryptophan metabolism
Rpdx1_0979
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Rpdx1_0979
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Rpdx1_0979
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rpdx1_0979
00930 Caprolactam degradation
Rpdx1_0979
Enzymes [BR:
rpx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Rpdx1_0979
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Rpdx1_0979
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Rpdx1_0979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
DAO
UDPG_MGDP_dh_N
FAD_binding_3
NAD_binding_2
F420_oxidored
GIDA
Pyr_redox_2
NAD_Gly3P_dh_N
NAD_binding_8
ApbA
AlaDh_PNT_C
2-Hacid_dh_C
Pyr_redox
TrkA_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ADU42606
UniProt:
E6VBN4
LinkDB
All DBs
Position
1047396..1049612
Genome browser
AA seq
738 aa
AA seq
DB search
MTFKNFKVDTDADGIALVTWDLPGKSMNVLDATTIEELGAIAEQTSKDAAVKGVVITSAK
EAFCAGADLSMLEGMNQQFAQIRKEKGEEAAQKMLFDESRKLSQILRGIETCGKPWVAAI
NGLALGGGFEVTLACHYRVAADNPKTRLGLPEIKVGLFPGGGGTQRIPRIVDPQSAMTIL
LKGDQIKLDKAKALKLVDAVVPAADLIKTAKDWIKGGGKAVAPWDEKGFKLPGGPVFSKQ
GMMMFPAGNAIYRRETYDNYPAARAIMSCVYEGLLVPMDVALRIESRYFAHVLQTKEAAA
MIRSLFLSMQELNKGARRPQGVPPTKVKKLAIIGAGFMGASVGYVSAKAGIEVVLIDRDQ
ESADKGKAHCQSVIEGLIKKGRAKEADRDALMSRITATADFNAISDADLVIEAVFEDRKV
KAETYAKAQPLLKEGAIFASNTSTLPINSLAEEFKDQSKFIGIHFFSPVEKMMLVEVILG
NNTSDATLAAALDYTRQIGKTPIVVNDSRGFFANRCVLRFTAEGLEMLMEGVPAPMIETA
AKMAGMPVGPLSLADEVALDLILKIMKATEADLGEQAVDQQQKKLMVELVEKQGRFGRKN
GKGFYVYPEKGKGQKSLWDGIAALQPKHLDPDTIDVEELKQRFLAVQAVEAARTVEDNVI
VDPREADVGSILGFGFAPFTGGTLSYIDFMGTKEFVALCHKLEGKYGSRFTPPKLLEDMA
KTGDTFYHRFAPKKQAAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaagaacttcaaagtcgacaccgacgccgacggcattgcgctcgtcacctgg
gatctgcccggcaagtcgatgaacgtgctcgacgccacgacgatcgaggaactcggcgcg
atcgccgagcagaccagtaaggacgccgcggtcaagggcgtggtgatcacttcggccaag
gaggcgttctgcgccggcgccgatctgtcgatgctggaaggcatgaaccagcagttcgcc
cagatccggaaggagaagggcgaggaagccgcccagaagatgctgttcgacgagagccgc
aagctgtcgcagatcctgcgcggcatcgagacctgcggcaagccgtgggtcgcggcgatc
aacggtctggcgctcggcggcggcttcgaagtgacgctggcctgccactatcgcgtcgca
gccgacaatccgaagacccggctcggcctgcccgagatcaaggtcggcctgttcccgggc
ggcggcggcacccagcggattccgcgcattgtcgatccgcagagcgcgatgaccatcctg
ctcaagggcgatcagatcaagctcgacaaggccaaggcgctgaagctggtcgacgcggtg
gtgccggcggccgatctgatcaagaccgccaaggactggatcaagggcggcggcaaggcg
gtggcgccgtgggacgagaagggcttcaagctgcccggcggcccggtgttctccaagcag
ggcatgatgatgttcccggccggcaacgccatctatcgtcgcgagacctacgacaactat
ccggcggcccgcgcgatcatgagctgcgtctatgagggcctgttggtgccgatggacgtc
gcgctgcgcatcgagtcgcgctacttcgcgcacgtcctgcagaccaaggaagcggcggcg
atgatccgcagcctgttcctgtcgatgcaggagctgaacaagggcgcgcgccgcccgcag
ggcgtgccgccgaccaaggtcaagaagctcgccatcatcggcgccggcttcatgggcgcc
agcgtcggctacgtctcggccaaggccggcatcgaggtggtgctgatcgatcgcgaccag
gagagcgccgacaagggcaaggcgcattgccagtcggtgatcgaaggtctcatcaagaag
ggccgcgccaaggaggccgaccgtgacgcgctgatgtcgcggatcaccgcgaccgccgac
ttcaatgcgatttcggatgccgacctcgtcatcgaagcggtgttcgaggatcgcaaggtc
aaggccgagacctacgccaaggcgcagccgctgctgaaggaaggcgcgatcttcgcctcc
aacacctcgacgctgccgatcaactcgctggccgaagagttcaaggatcagtcgaagttc
atcggcatccacttcttctcgccggtcgagaagatgatgctggtcgaagtgatcctcggc
aacaacaccagcgacgccacgctggcggcagcgctggactacacccggcagatcggcaag
accccgatcgtggtcaacgacagccgcggcttcttcgccaaccgttgtgtgctgcgtttc
accgccgaaggcctcgagatgctgatggaaggcgtcccggcgccgatgatcgagaccgcc
gccaagatggccggcatgccggtcggcccgctgtcgctggccgacgaagtcgcgctcgac
ctgatcctgaagatcatgaaggcgaccgaagccgacctcggcgaacaggcggtcgatcag
cagcagaagaagctgatggtcgagctggtcgagaagcagggccggttcggccgcaagaat
ggcaagggcttctacgtctatccggagaagggcaagggtcagaagagcctgtgggacggc
atcgccgcgctgcagcccaagcacctcgaccccgacaccatcgacgtcgaagagctgaag
cagcgcttcctcgccgtccaggcggtggaagcggcgcgcaccgtcgaggacaacgtcatc
gtcgatccgcgcgaggccgatgtcggctcgatcctcggcttcggcttcgcgccgttcacc
ggcggcacgctcagctacatcgacttcatgggtaccaaggagttcgtggcgctgtgccac
aagctcgagggcaaatacggctcgcgcttcaccccgccgaagctgctcgaagacatggcc
aagaccggcgacaccttctaccaccgcttcgccccgaagaagcaggcggcggcgtaa
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