Rhodopseudomonas palustris DX-1: Rpdx1_1212
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Entry
Rpdx1_1212 CDS
T01381
Name
(GenBank) glycyl-tRNA synthetase, beta subunit
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rpdx1_1212
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rpx01007
]
Rpdx1_1212
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpx03016
]
Rpdx1_1212
Enzymes [BR:
rpx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
Rpdx1_1212
Amino acid related enzymes [BR:
rpx01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Rpdx1_1212
Transfer RNA biogenesis [BR:
rpx03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Rpdx1_1212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
ADU42838
UniProt:
E6VEA7
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All DBs
Position
1289833..1292073
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AA seq
746 aa
AA seq
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MPDLLLELFSEEIPARMQGKAADDLKRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP
ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYVALIEKPGRPA
IEVIAEILPVIVRTFPWPKSMRWGARSAKPGALQWVRPLHSIVATFGIDTEEPDVVHFNV
DGIEAGQTTRGHRFMAPDAFEVRRFEDYEAKLFAAKVVLDPQRRRDIILADAKTLAQAQN
YELVEDAGLLDEVSGLVEWPVPLMGSFDKDFLSIPDEVIRATIRANQKCFVVADPATGKL
ANKFILTANIEASDGGAAITAGNERVIRARLSDAKFFYETDLKTKLEDRLPKFDQIVFHE
KLGTQAERIERIERLAAEIAPLVGADVEKTKRAAKLCKADLLTEVVGEFPELQGLMGKYY
ALAQGEDASVAAACEEHYKPQGPADRVPTDPVSIAVALADKLDTLVGFWAIDEKPTGSKD
PYALRRAALGVIRLIVDNKLRLNIFDLSARPFARNAKAVLFDEFRAAMELVQRVEDELPP
GTIISISELATAFRYRQIAEADLVAGQMRKAALDLLSFFADRLKVQLRDQGARHDLVDAV
FALEGQDDILMIVRRVEALAAFLATDDGKNLLAGTKRAANILRIEEKKDGRAFDGAPDAS
LYAQDEERALAAAIDRAKAEAGAAVAKEDFAAAMTAMAGLRPAVDAFFDKVTVNADDKAV
RENRLKLLNEIRAATRAVADFSKIQD
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctcctcctcgaactgttctccgaagaaatcccggcgcggatgcaggggaag
gctgctgatgatctgaagcggctggtcaccgacaagctcgtcgccgaagggctcgtctac
gagggcgcgaaagcgtttgcgacgccgcggcggctgacgctgacggtgcatggcattccg
gcgcggcagccggatctgaaggacgagcgcaaggggccgaaggtcggcgcgccggatgcc
gccgtgcagggctttctcaaggccaccgggctcgcctcgctggacgaggccaagatccag
cgagatccgaagaagggcgacttctatgtcgcgctgatcgagaagccgggccggccggcg
atcgaggtgattgccgaaatcctgcccgtcatcgtccgcaccttcccgtggccgaagtcg
atgcgctggggcgcgcggtcggccaagcccggcgcgctgcaatgggtgcggccgctgcat
tcgatcgtcgccaccttcgggatcgacaccgaagagcccgacgtggtgcatttcaacgtc
gacggcatcgaggccgggcagaccacgcgcggtcatcgcttcatggcgcccgacgcgttc
gaggtgcgacgcttcgaggactacgaagccaagctgttcgccgccaaggtcgtgctcgat
ccgcagcgacgccgcgacatcatcctggccgacgccaagacgctggcgcaggcgcagaac
tacgaactggtcgaggatgctggcctgctcgacgaagtctccggcctggtcgagtggccg
gtgccgttgatgggctcgttcgacaaggacttcctgtcgatcccggacgaagtgatccgc
gccaccatccgcgccaaccagaagtgcttcgtggtcgccgatcctgcgaccggcaagctc
gccaacaagttcatcctgaccgcgaatatcgaagccagcgacggcggcgccgccatcacc
gccggcaacgagcgcgtgatccgcgcgcgattgagcgacgcgaagttcttttacgagacc
gatctgaagaccaagctggaagaccggctgccgaagttcgaccagatcgtgttccacgaa
aagctcggcacccaggccgaacggatcgaacgcatcgaacgcttagccgccgagattgca
ccgctggtcggcgccgatgtcgaaaagaccaagcgcgctgcgaagctctgcaaggcggac
ctgctcaccgaggtcgtcggcgaattccccgaactgcagggcctgatgggcaagtactac
gcgctggcccagggcgaagatgcctctgtcgccgcagcgtgcgaggaacactacaagccg
caggggccggccgatcgcgtcccgaccgatccggtcagcatcgcggtcgcgctggccgac
aagctcgacacgctggtcggattctgggcgatcgacgagaagccgacgggcagcaaggac
ccgtatgcgctgcggcgggcggcgctgggggtgattaggctgatcgtcgacaacaagctc
agattgaacatcttcgatctatcggcgcggccgttcgctcgtaacgcgaaggctgtcttg
ttcgatgagttccgcgcggcgatggaactggtgcagcgcgtcgaagatgagcttccccct
ggtacgatcatctcgatttctgaacttgcgacggcatttcggtatcgccagattgcagaa
gcagatctggtcgccgggcagatgagaaaggctgcactagacctcctctccttcttcgcc
gaccgcctcaaggtccagctccgcgaccaaggcgctcgtcacgatctcgtcgacgcggtg
ttcgcgctggaaggccaggacgacatcctgatgatcgtccgccgcgtcgaggcgctggcg
gcgtttctggccaccgacgacggcaagaatctgctcgccggcaccaagcgcgccgccaac
attctgcgcatcgaggagaagaaggacggccgcgcattcgacggcgcgccggatgcttcg
ctgtatgcgcaggatgaggagagggcactcgccgccgcgatcgaccgtgccaaggcggag
gccggtgcggccgtcgccaaggaagacttcgccgcggcgatgaccgcgatggcgggtctg
cggccggcggtcgatgcgttcttcgataaggtgacggtcaacgccgacgacaaggccgtc
cgcgaaaaccgcctgaagctgctcaacgaaatccgcgccgcgacccgcgcggtggcggat
ttttcgaagatccaggactaa
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