Rhodopseudomonas palustris DX-1: Rpdx1_1265
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Entry
Rpdx1_1265 CDS
T01381
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rpdx1_1265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_1265
Enzymes [BR:
rpx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Rpdx1_1265
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rpdx1_1265
RecFOR pathway proteins
Rpdx1_1265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF5990
Motif
Other DBs
NCBI-ProteinID:
ADU42890
UniProt:
E6VFA2
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All DBs
Position
1346973..1347494
Genome browser
AA seq
173 aa
AA seq
DB search
MSQPSIRSVRILGIDPGLRRTGWGVVESEGNRLIYVACGSVEPRDTLPLAERLLAIHDGL
AKVLAAHAPAEAAVEQTFVNKDGAATLKLGQARGVAMLVPAMHGLLVAEYAPNLVKKTVV
GAGHADKTQIQMMLKILLPKAEPKTADAADALAIAITHAHHRVSAQRLKAVSA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccctcgattcgcagcgtccgtattctcgggatcgaccccggcctccgccgc
accggctggggcgtggtcgagagcgagggcaatcggctgatctatgtggcgtgcggctcg
gtggagccgcgggacacgctgccgctggccgagcggctgctggcgatccatgacgggctc
gccaaggtgctggccgcccacgcgccggccgaggccgcggtcgagcagaccttcgtcaac
aaggacggcgccgcgacgctgaagctcggccaggcgcgcggcgtggcgatgctggtgccg
gcaatgcacggtctgctggtcgccgaatacgcccccaatctcgtcaagaagacggtggtg
ggcgccggccacgccgacaagacccagatccagatgatgctgaagatcctgctgcctaag
gccgagccgaaaaccgccgacgccgccgatgccctcgccatcgccatcacccacgcccac
catcgcgtcagcgcacagcggctgaaggcggtgagcgcatga
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