Rhodopseudomonas palustris DX-1: Rpdx1_1424
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Entry
Rpdx1_1424 CDS
T01381
Name
(GenBank) NAD-dependent epimerase/dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00521
Streptomycin biosynthesis
rpx00523
Polyketide sugar unit biosynthesis
rpx00525
Acarbose and validamycin biosynthesis
rpx00541
Biosynthesis of various nucleotide sugars
rpx01100
Metabolic pathways
rpx01110
Biosynthesis of secondary metabolites
rpx01250
Biosynthesis of nucleotide sugars
Module
rpx_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Rpdx1_1424
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Rpdx1_1424
01055 Biosynthesis of vancomycin group antibiotics
Rpdx1_1424
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Rpdx1_1424
00525 Acarbose and validamycin biosynthesis
Rpdx1_1424
Enzymes [BR:
rpx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Rpdx1_1424
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
ADU43046
UniProt:
E6VHF7
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All DBs
Position
1520736..1521773
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AA seq
345 aa
AA seq
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MTGIVPASAPCAMARAGFDKYLVIGSNSFTGASMVSYLLDQGAEVVGISRSDEPHPAFLP
YRWKNADRFRFHRLDLNHDLDAIMQMVTAERFPCIINFAAQSMVGESWANPDHWFMTNVV
STVRLHERLRTCDFLERYVHVTTPEVYGNATGTLTEDAVFDPSTPYAVSRAAGDMSLRSY
FRAYGFPVLFTRAANVYGPGQRLYRIVPRTILFIKLGRKLQLHGGGTSERSFIHAADVAD
ATRRIACNGKLGDSYHISTDRIVTIRALVEMICAMMGARFEDQVEIVGDRLGKDSAYKLD
SSKLRSELGWSDQITLEQGIEQTIAWIDRWFEELKSQPFDYAHKP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggtatcgttcccgcgtccgcgccgtgtgcaatggcccgcgcgggcttcgacaaa
tatctggtgatcggttcgaactcgttcaccggcgcttcgatggtcagctatctgctcgac
cagggcgccgaggtcgtcggcatcagccgctccgacgagccgcacccggcgttcctgccg
tatcgctggaagaatgccgaccgcttccggtttcacaggctcgacctcaatcacgatctc
gacgcgatcatgcagatggtgaccgccgagcggtttccctgcatcatcaatttcgcagct
cagagcatggtcggcgagagctgggccaacccggatcattggttcatgaccaatgtggtg
tcgacggtgcggctgcacgagcggctccggacttgcgacttcctcgagcgctacgtccac
gtcaccacgccggaagtctatggcaacgccaccggcacgctgaccgaggacgcggtgttc
gatccctcgacgccctatgcggtgtcgcgcgcggccggcgacatgagcctgcgctcgtat
ttccgtgcctacggctttccggtgctgttcacccgcgccgccaatgtctatgggccgggg
caacggctgtaccggatcgtgccgcgcaccatcctgttcatcaagctcggccgcaagctg
caactgcacggcggcggcacctcggagcgctcgttcatccatgccgccgatgtcgccgac
gccacgcggcggatcgcctgcaacggcaagctcggcgacagctatcacatctcgaccgat
cgcatcgtcaccatccgcgcgctggtcgagatgatttgcgcgatgatgggggcgcggttc
gaggaccaggtcgagatcgtaggcgatcggctcggcaaggactccgcctacaagctcgac
agcagcaagctgcgcagcgagctcggctggagcgatcagatcacgctggagcagggcatc
gaacagacgatcgcgtggatcgatcgctggttcgaggagctgaagagccagccgttcgac
tacgcccacaagccttga
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