Rhodopseudomonas palustris DX-1: Rpdx1_1700
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Entry
Rpdx1_1700 CDS
T01381
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Rpdx1_1700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_1700
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Rpdx1_1700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
GATase_3
Motif
Other DBs
NCBI-ProteinID:
ADU43317
UniProt:
E6VKS8
LinkDB
All DBs
Position
complement(1807734..1808618)
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AA seq
294 aa
AA seq
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MPRAYWKGTLKLSLVTCPVALYPATTSVEKTRFHMINAETGNRLKQQMIDEDTGEVVEKD
QKARGYEVHKGKYIEIEKDELEAVQIESTHTIDIDSFVPADEIDQRFLNHPYYIVPDGKA
GVDAFAVIRDAMKDKGRVALGRIVLTNREHVLAIEPFGKGLLATTLRYPYELRDADEYFD
GIKSPKVSKDMIELAGHILETKAAHFDPKKFKDEYETALKALVKRKASGKSIKLPESEEK
ESNVVSLMDALKQSLEGGKSGAKTGKAHGRRKASPSSRTTTKARRSNARQRKAG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgcctactggaagggcacgctgaagctgtccctcgtcacctgcccggtggcg
ctatatccggcgacgaccagcgtcgagaagacccgcttccacatgatcaatgcggaaacc
ggcaatcggctgaagcagcagatgatcgacgaagacaccggcgaggtggtcgagaaggat
cagaaggcccgcggctacgaggtgcacaagggcaagtacatcgagatcgaaaaggacgaa
ctcgaagcggttcagatcgagagcacccacaccatcgacatcgacagcttcgtgccggcc
gatgaaatcgaccagcgcttcctcaatcatccgtattacatcgttccggacggcaaggcc
ggcgtcgacgccttcgcggtgatccgcgacgcgatgaaggacaaaggccgcgtcgcgctc
ggccgcatcgtgctcaccaaccgcgagcatgtgctggcgatcgagccgttcggcaagggg
ctgctggcgaccaccctgcgctacccttacgagctgcgcgatgcggacgagtatttcgac
ggcatcaaatcgccgaaagtctccaaggatatgatcgaactcgccggccacatcctcgag
accaaggcggcgcatttcgatcccaagaagttcaaggacgaatacgagaccgccctgaag
gcgctggtcaagcgcaaggcctccggcaagtcgatcaagctccccgaatccgaggagaag
gagagcaacgtcgtcagcctgatggacgcgctgaagcagagtctcgaaggcggcaaatcc
ggagccaagaccggcaaggctcacggccgccgcaaagcctccccctcctcccgcaccacc
accaaagcccgccgctccaacgcaaggcagcgcaaggcggggtga
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