Rhodopseudomonas palustris DX-1: Rpdx1_1818
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Entry
Rpdx1_1818 CDS
T01381
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00300
Lysine biosynthesis
rpx00550
Peptidoglycan biosynthesis
rpx01100
Metabolic pathways
rpx01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rpdx1_1818
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rpdx1_1818
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rpdx1_1818
Enzymes [BR:
rpx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Rpdx1_1818
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ADU43431
UniProt:
E6VLS0
LinkDB
All DBs
Position
1935210..1936649
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AA seq
479 aa
AA seq
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MSKEPLWTSDAMAEAMAATRSGTLPRDVFGISIDSRTLAPGDAYFAIRGDVHDGHDFVAA
ALNAGAALAVVEKAQRDKFAADAPLLVVDDVLEGLRRLGIAARSRLSAKVIAVTGSVGKT
STKEGLRSVLGAQGPTHASVASFNNHWGVPLTLARCPAGVRYAVFEIGMNHAGEIEPLVK
MVRPHVAIITTVEPVHLEFFSGVEGIADAKSEIFSGLEPGGIALLNRDTPMFDRLSANAL
RANVGRIVTFGTDPAADARLLDVALHADCSAVHASILGHDVTYKIGMPGRHMALNSLAVL
AAAELVGADLALAALAMSQVQPAVGRGARKALPIGSGEATLIDESYNANPASMAAALGVL
GRAEIGAQGRRIAVLGDMLELGPTAGELHRGLEAAVRANGIDLVFCCGPLMRNLWDALSS
GKRGGYAGDATALESQVVAAIRAGDAVMVKGSLGSRMKTIINAIEKRFPGKAARDDAAV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaccgctatggacgtcggacgcgatggcggaggcgatggccgcgactcgc
agcggcacgctgccgcgcgacgtgttcggaatctcgatcgacagccgcacgctggcgccg
ggtgacgcgtatttcgcgattcgcggcgacgtccacgatggccacgatttcgtcgctgcg
gcactgaatgccggcgccgcgctggcagtggtggagaaggcgcagcgcgacaagtttgct
gccgacgcgccgctgctcgtcgtcgacgatgtactcgaagggctgcgccgactcggcatc
gcggcgcgctcgcgcctgtcggccaaggtgattgccgtgaccggctcggtcggcaagacc
tcgaccaaggaaggcctgcgcagtgtgctcggcgcccaaggcccgacccacgcctcggtg
gcgtcgttcaacaatcactggggcgtgccgctgacgctggcgcgatgcccggcgggcgtg
cgctacgcggtgttcgagatcggcatgaatcacgccggcgaaatcgaacctctggtcaag
atggtgcgacctcatgtggcgatcatcaccacggtggagccggtgcatctggaattcttc
tcgggcgtcgaaggcattgccgacgccaagtcggagattttcagcgggctcgagccgggc
ggcatcgcgctgctgaaccgcgacacgccgatgttcgaccggctcagtgccaatgcgctg
cgtgccaatgtcggccgcatcgtcaccttcggaaccgatcccgccgccgatgcgcggttg
ctcgacgtcgccttgcatgccgactgctcggcggtgcacgccagcattctcggccacgac
gtcacttacaagatcggcatgccgggtcggcacatggcgctgaactcgctggcggtgctg
gccgcggcggagctggtcggcgccgacctcgcgctcgccgcgctggcgatgtcgcaggtg
caacccgccgtggggcgtggggcgcgcaaggcgctgccgatcgggtccggcgaggcgacg
ctgatcgacgagagctacaacgccaatccggcctcgatggcggcggcgctgggcgtgctc
ggccgcgccgagatcggggcgcagggccggcggatcgcggtgctcggcgacatgctcgag
ctcggcccgaccgccggggaactgcaccgcggtctggaagcggcggtccgggccaacggt
atcgacctggtgttctgctgtggtccgttgatgcgcaatttgtgggacgccctttcctcc
ggcaaacgggggggctatgcaggcgacgcgaccgcgctcgaatcccaggtcgtcgctgcg
atccgcgccggcgacgccgtgatggtgaagggttcgctcggttcacgcatgaaaacgatt
atcaatgcgatcgaaaagcgcttccccggcaaggccgcgcgcgacgacgctgcggtataa
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