Rhodopseudomonas palustris DX-1: Rpdx1_2119
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Entry
Rpdx1_2119 CDS
T01381
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_2119
Enzymes [BR:
rpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rpdx1_2119
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Rpdx1_2119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Peptidase_C14
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Peptidase_C13
FAS_I_H
Motif
Other DBs
NCBI-ProteinID:
ADU43717
UniProt:
E6VQ40
LinkDB
All DBs
Position
2266244..2269348
Genome browser
AA seq
1034 aa
AA seq
DB search
MPFHGLFIGIDRYSSTGIDELTCARRDATALEALFFDTLGGSTILLADAEATRQRIEDAF
ADLAGCGPEDTVVIAFSGHGSETHELVTHDANPDDLAGSAIPLELLQEWFSRIPAKRLIL
FLDCCFSGGIGAKVLRVDAKPRSLLSAEARLAQLGGAGRIIFTASAANEPAYEHRRFGHG
FLTHFLLEALCGAEEVVSGGKLSLYRLLEHVTSRVRAAALQGGKEQNPTMRGSIDGDVEW
PVFVPGAKYQAAFPARPPAKVTSDLANLSSAGFPDALVTAWAGAIPSLNALQIAAITDFG
VLDGENLVVSAPTSSGKTMVGELAALRNVLDRKRALFLLPLKALVADKRRHFESVYGGFG
VRTVEATGETDDITPLLRGQYDVGLLTYEKFAAIALTFPHVLAQVGVIVIDEAQMIADRG
RGANLEFVLTLIRMRRREGIEPQLIALSAVIGDTNGLEQWLGARLLRRTERPVPLAEGLL
LGTGHFRFLDPENGNERVEGPLVRRLVGGKGSSQDWIIPLVRKLVAEGQQVIVFRETKGE
ARGCANYLAESLGLPPAAEALTQMPGGDPSQASADLRSALGSGVAFHNSDLDREERRVIE
EEFRRSGSGLRVIAATTTLAMGVNTPASSVVIAGLNHPGDEPYSVAEYKNLVGRAGRLGF
SEKGASYLLALDPRAEHDLWSRFVTAEPEDLVSRFLDGTTDPRSLIIRVLVAARRAAGEG
VPSEEIVEFLESSFGAFQARRAHSAWQWSRPDLLSALADLERHGLVQKNAIGAYELTKLG
RLAGESAAEVGSIVALVDCLGSLQPQDISDPVLIAAAQTTVEVDQLLFPINRKSTQKEPQ
LWPNELRRQNVPWHVLNALHRGTTDDHQATLRAKKAVACLLFVSGRAMSEIERVLTQFGG
AFGGAAGPIRAVAARTCDLMPVAARVSEILHPTLDLGDRVRRLAIRLTYGVPSSAVDLAQ
FAGADLLRGDYCRLAAAQLCEPAQIDAASDEQILACVDKDRRKLAFVRDAAKRVAKRRAE
AVTPSVPLLEAYAP
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttcacggcctgttcatcggcatcgaccgttatagctcgaccggcattgatgag
ctgacctgcgcgcgtcgtgacgcgacagcgctggaggcgctgttcttcgacacgctgggc
ggcagcaccatcttgctggcagatgcggaggccacgcggcagcggattgaggacgcattt
gccgacctggccggctgcggccccgaggatacggtggtgatcgcattctccggccatggg
tcggagacgcatgagctcgtcacccacgacgcgaatcccgatgatctcgccggttctgcg
atcccgctcgagctgttgcaggaatggttctcgcggataccggcgaagcgcctgatcctg
ttcctcgactgttgtttttccggtggcattggcgcgaaggttctgcgcgtcgatgcaaag
ccgcgcagtcttttgtccgccgaagcgcgcctggctcaacttggcggcgctggccggatc
atcttcaccgcctccgcggcgaacgagcccgcctatgagcaccgccggttcgggcacggc
tttctgactcactttctgctggaggcgctatgtggcgccgaggaagtcgtgagcggcggc
aagctctcgctctaccgcctcctggagcatgtcacgagccgcgtcagggcggccgcgctg
cagggcggcaaagaacagaacccgaccatgcgcgggagcatcgacggcgatgtcgagtgg
cctgtgttcgtgccaggtgcgaagtatcaggccgccttcccggcacgtccgcctgccaag
gtgacatcagatcttgccaacctctcgtcggccggtttcccggacgcgcttgtcaccgcc
tgggctggagcgatcccgtccttgaacgcgcttcagatcgccgccatcaccgacttcggc
gtgctggacggcgagaacctggtggtgtcggccccgacatcctctggcaagacgatggtg
ggcgagctcgcggcgctccggaacgtgctggatcgcaaacgggctttgtttctgttgccg
ctcaaggctctcgtggcggacaagcggcggcacttcgagagcgtctatggcggtttcggg
gtccgcacggtggaagcgacgggcgagacggacgacatcacgcctctgctgcggggccaa
tacgatgtcggcctcctgacctatgagaagttcgctgcgatcgcgctgacattccctcat
gtgttggcgcaggtcggcgtgatcgtgatcgacgaagcgcagatgatcgccgatcgtggt
cgcggcgccaatctagagttcgttctgacgctcatccggatgcgccggcgtgaagggatc
gagccccaactgatcgcgctttcggcggtgatcggggacacgaacggccttgagcaatgg
ctcggcgcgcggctcttgcggcgcacagagcggcccgttccgcttgcggagggcttgttg
ctcggcactgggcacttccgcttccttgatccggagaacggcaatgagcgggtggagggg
ccgctcgttcggcgtcttgttggcggcaagggatccagccaggattggatcatcccgctg
gtgcgcaagcttgtcgccgaaggccagcaggtgatcgtgtttcgtgaaaccaagggcgaa
gcccgcggctgcgccaactatctcgcggagtcgctcggattgcctccggctgccgaggcg
ctgacgcagatgcccggcggcgacccctcgcaggccagcgccgacttgcggagcgcgctg
gggagtggcgtcgctttccacaactcggatctcgaccgcgaagagcggcgcgtcatcgag
gaagaatttcgccgtagcggctcgggcctgcgtgtcattgcagccacaacgacactggcg
atgggcgtgaacacgcccgcgtcatcggtcgtcatcgccggcttgaatcatcccggcgac
gagccctattcggtggccgaatacaagaacctcgtcggccgcgcgggaaggctcggcttc
tccgagaagggggcttcgtatctgctggcgctcgatccgcgcgccgaacatgatctgtgg
tcgcgctttgtgaccgcggagccggaagacttggtgtcccgcttcctcgacggtacgacc
gacccgcgctccttgattatccgtgttctggtcgcggcacgacgagcggccggcgaaggc
gtgccgagcgaggagattgtcgagtttctggaatcgagcttcggcgcgttccaggcccgg
cgcgcccacagcgcgtggcagtggagccggccggacctgctttcggcgctggcggatttg
gaacgccacggcctggtgcagaagaacgccataggcgcgtatgagctgaccaagctgggc
cgtctcgccggcgagagcgcagccgaggtcgggtccatcgtcgcgctcgtagattgcctc
ggctcgctccagccccaagacatcagcgatcccgtcctgatcgccgcagcccaaacgacg
gtcgaggtcgatcaactcctctttccgatcaaccggaaaagcacgcagaaagaaccccag
ctttggcccaacgagctgcggaggcaaaatgtgccgtggcacgtcctgaacgcgcttcat
cgggggaccacagacgatcatcaggcaacgctgcgtgcgaagaaggcggtcgcttgtctc
ttgttcgtgtccggtcgcgcgatgagcgagatcgagcgcgtgctgacgcagttcggcggg
gcgtttggcggcgccgccggcccgatacgcgcggtcgcagcgcggacttgcgatttgatg
cccgtcgcggctcgcgtcagcgaaatcctgcacccgacactcgatctcggtgaccgtgtg
agacgtttggcgatccggttgacgtatggcgtgcccagctccgccgtcgacctcgcccag
ttcgccggagccgatttgctgcggggcgactattgtcgcttggccgccgcgcagctctgt
gagcccgcacagatcgacgccgcaagcgacgagcaaattctggcgtgcgtggacaaggac
cggcgcaagcttgcttttgtccgcgatgcggcgaagcgcgttgccaagcgtcgggccgaa
gcggtcacgccgtcagtcccgctcctcgaagcctatgcgccctga
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