Rhodopseudomonas palustris DX-1: Rpdx1_2207
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Entry
Rpdx1_2207 CDS
T01381
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rpdx1_2207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpx03021
]
Rpdx1_2207
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_2207
Enzymes [BR:
rpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rpdx1_2207
Transcription machinery [BR:
rpx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rpdx1_2207
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rpdx1_2207
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
ADU43800
UniProt:
E6VBY0
LinkDB
All DBs
Position
2365851..2366870
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AA seq
339 aa
AA seq
DB search
MTIQKNWQELIRPNKLQVTAGSDATRFATLVAEPLERGFGQTLGNALRRVLLSSLQGAAV
QSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISLKMQGEGPKRMVIKKSGPGVVTAGDIQ
TVGDIVVLNPDLQLCTLDDGAEIRMEFTVNTGKGYVAAERNRPEDAPIGLIPVDSLYSPV
RKVSYKVENTREGQILDYDKLTMTVETNGAITPEDAVAYAARILQDQLNVFVNFEEPRKE
VTQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatccagaaaaattggcaggaattgattcggccgaacaagctccaggttacggcc
gggagcgatgccacccggttcgcgacgctggtcgccgagccgctcgagcgcggcttcggc
cagacgctcggcaacgcgctgcgccgcgtgctgctgtcgtcgttgcagggcgctgcggtg
cagtcggtgcatatcgacggtgtgctgcacgagttctcctcgatcgccggcgtgcgcgag
gacgtcaccgacatcgtgctgaacatcaaggacatctcgctgaagatgcagggcgaaggc
ccgaagcggatggtcatcaagaagtccggtccgggcgtcgtcaccgccggtgacatccag
accgtcggcgacatcgtcgtgctgaacccggatctgcagctctgcacgctggacgacggc
gccgagatccgcatggagttcaccgtcaacaccggcaagggttacgtcgccgccgagcgc
aaccgtcccgaggacgcgccgatcggcctgatcccggtcgacagcctgtattcgccggtt
cgcaaggtgtcgtacaaggtcgagaacacccgcgagggccagatcctcgactacgacaag
ctgactatgacggtggagaccaacggcgcgatcacgccggaagacgccgtcgcctacgcg
gcgcgcatcctgcaggatcagctcaacgtcttcgtcaacttcgaagagccgcgcaaggaa
gtcacccaggagatcatcccggatctggccttcaacccggcgttcctcaagaaggtggac
gagctggagctgtcggtgcgttcggcgaactgcctgaagaacgacaacatcgtctatatc
ggcgacctggttcagaagtcggaagccgaaatgctccgcaccccgaacttcggccgcaag
tcgctgaacgagatcaaggaagtgctggcgcagatgggcctgcatctcggcatggaagtg
ccgggctggccgccggagaacatcgacgagctcgccaagcgcttcgaagatcactactga
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