Rhodopseudomonas palustris DX-1: Rpdx1_2339
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Entry
Rpdx1_2339 CDS
T01381
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_2339
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rpdx1_2339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
AAA_16
AAA_22
AAA_30
AAA_24
Lon_C
AAA
RecA_N
nSTAND_NTPase5
SLFN-g3_helicase
nSTAND3
MCM
ADK_lid
MeaB
AAA_5
NACHT
CobU
NPHP3_N
ATPase_2
AAA_14
AAA_19
AAA_29
DZR
Zn_ribbon_8
NTPase_1
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ADU43930
UniProt:
E6VDJ6
LinkDB
All DBs
Position
complement(2514350..2515807)
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AA seq
485 aa
AA seq
DB search
MAKATSSFVCQNCGAAFNRWQGKCEACGEWNTLVEEASDNAVPVSIRAKRRGRTFKLESL
AGKSNDAPRLPSGMAELDRVTGGGFVRGSVLLVGGDPGIGKSTLLTQATSLMAKAGHRTV
YISGEEAIAQVRLRAERLGLASAPVELAAETSVEDIIATLSEGATPKLIVIDSIQTMWTD
TVESAPGTVTQVRASAQALIRFAKKTGAAIILVGHVTKDGQIAGPRVVEHMVDAVLSFEG
EGSQQFRILRSVKNRFGPTDEIGVFEMTGLGLREVSNPSELFLSERDLGSPGTAVFAGIE
GTRPVLVELQALVAPSTLGTPRRAVVGWDSARLSMVLAVLEAHCGVKLSGYDVYFNVAGG
LRINEPAADLAAAAALVSSLANAPLPPDAVYFGEISLSGAVRPVAQTPARLKEAAKLGFA
RAVLPEQTRGEAPADAGLALQSVGGLSSLVADIAARGTRRSDDDGTPRTKAASNATPARF
RRQEG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagccacctcctccttcgtctgtcagaactgcggcgcggcgttcaatcgctgg
cagggcaaatgcgaggcgtgcggcgagtggaatacgctggtcgaagaggccagcgacaac
gctgtgccggtgtcgatccgcgccaagcggcgcggccggacgttcaagctggagtcgctg
gccggcaagagcaacgacgcgccgcggctgccgtcgggcatggccgaactcgaccgcgtc
accggcggcggcttcgtgcgcggctcggtgctgctggtcggcggcgatcccggcatcggc
aaatcgacgctgctgacccaggccaccagcctgatggccaaggccggacatcgcaccgtt
tacatctccggcgaagaagcgatcgcccaggttcggctgcgcgccgaacggctgggcctc
gcctccgcacctgtcgaactcgccgccgagacctcggtcgaggacatcatcgcgacgctg
tccgaaggcgcgacgccgaagctgatcgtgatcgattcaattcagacgatgtggaccgac
accgtcgagtcggcgccgggtacggtgacccaggtccgcgcctcggcgcaggcgctgatc
cgcttcgccaagaagaccggcgcggcgatcatcctggtcggccacgtcaccaaggacggc
cagatcgccggtcctcgcgtggtcgagcacatggtcgatgcggtgctgtcgttcgaggga
gaaggatcgcagcagttccggatcctgcgctcggtcaagaaccggttcggcccgaccgac
gagatcggcgtgttcgaaatgaccgggctgggcctgcgcgaagtcagcaatccgtcggag
ctgttcctgtcggagcgcgacctcggctcgccgggcaccgcggtgtttgccggcatcgaa
ggcacccgcccggtgctggtggaattacaggctctggtggccccttcgacgctcggcacc
ccgcggcgcgcggtggtgggatgggattcggcgcggctgtcgatggtgctggcggtgctg
gaggcgcattgcggcgtcaagctgagcggctacgacgtctatttcaacgtcgccggcggc
ctgcgcatcaacgagcccgccgccgacctcgccgccgccgccgcactggtttcgtccctg
gccaacgcgccgctgccgccggacgcggtgtatttcggcgagatctcgctgtcgggcgcg
gttcgcccggtggcgcagaccccggcccggctgaaggaagccgccaagctcggcttcgcc
cgtgcggtgctgccggaacagacccgcggcgaagccccggccgatgccgggctggcgctg
caatcggtcggcgggctgtccagcctggtcgcggacatcgccgcgcgcggcacgcggcgg
agcgacgacgatggtacgccgcggaccaaagctgcctcaaatgcaacaccggcgcgattc
cggcgccaggagggttga
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