Rhodopseudomonas palustris DX-1: Rpdx1_2356
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Entry
Rpdx1_2356 CDS
T01381
Name
(GenBank) aminodeoxychorismate lyase
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpx01011
]
Rpdx1_2356
Enzymes [BR:
rpx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Rpdx1_2356
Peptidoglycan biosynthesis and degradation proteins [BR:
rpx01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Rpdx1_2356
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YceG
Motif
Other DBs
NCBI-ProteinID:
ADU43947
UniProt:
E6VDL3
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Position
2531489..2532742
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AA seq
417 aa
AA seq
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MSERPPISPRSPRAALEPEQLPPPPKRSDHARNPLVIVGNAIITFIVVVMIGAGGLYVYG
KNKLEAPGPLAQDKTVNIPQRAGLDDIAQILKREGVIEDGWLVFAGGVIALRARTELKPG
EYLFQKNASLRDVIGTIVEGKVVQHAVTIPEGLTSEQIVERLSDNPIFTGSIREIPREGT
LLPETYKFPRGTPREQVLNRLQQAQKRILGEIWERRNPDLPIKTPEQLITLASLVEKETG
KSDERTRVAAVFVNRLQKKMRLQSDPTIIYGLVGGKGTLGRPIKRSEITQPSPYNTYVID
GLPPGPIANPGRASLEAAANPARTRDLYFVADGSGGHAFSDSYEQHQKNVAKLRALERQQ
QNDTVEPAEEPASSAAAPAPDAAADPAATAATTGSPKAKSGAQKRRVRNGTPNGATE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaggccgccgatttcgccgagaagcccacgcgcggcactcgagccggagcag
cttccgccgccgccgaagcggtcggaccatgcgcgcaatccgctggtgatcgtcggcaac
gcgatcatcaccttcatcgtcgtggtgatgatcggcgccggcggcctgtacgtctacggc
aagaacaagctggaagcgccggggccgctcgcgcaggacaagaccgtcaacattccgcag
cgcgccggtctcgacgacattgcgcagatcctgaagcgcgaaggggtgatcgaagacggc
tggctggtgttcgcgggcggcgtgatcgcgctgcgggctcgtaccgaactgaagccgggc
gagtatctgttccagaagaacgccagcctgcgcgacgtgatcggcaccatcgtcgagggc
aaggtggtgcagcacgcggtgacgattccggaagggctgacatccgagcagatcgtcgag
cggctgtccgacaatccgatcttcaccgggagcatccgcgaaattccgcgtgaaggaacg
ttgctgcccgagacttacaaattcccgcgcggcacgccgcgcgaacaggtgctgaaccgt
ctgcagcaggcgcagaagcgcatcctcggcgagatctgggagcgccgcaatccggacctg
ccgatcaagacgccggagcaactgataaccttggcctcgctggtcgagaaggagaccggc
aagtccgacgagcgcacccgcgtcgccgccgtgttcgtcaaccgcctgcagaagaagatg
cggctgcagtccgacccgacgatcatctacggtctggtcggaggcaagggcacgctcggc
cgtccgatcaagcgcagcgagatcacccagccgtcgccttacaatacctacgtgatcgac
ggactgccgcccgggccgatcgccaatccggggcgggcttcgctggaagccgccgccaat
ccggcacgcacccgcgatctgtatttcgtcgccgacggcagcggcggtcacgcgttcagc
gacagttacgagcagcaccagaagaacgtcgccaagctgcgcgctctcgaacgccagcaa
cagaacgatacggtcgagccggcggaggagccggcgtcgagtgctgctgcgcctgcgccc
gatgccgcagcagaccctgcggccaccgcggcgaccaccggctcgcccaaggccaagtcc
ggtgcgcagaagcgacgcgtccgcaacgggacgccgaatggcgcaaccgagtag
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