Rhodopseudomonas palustris DX-1: Rpdx1_2708
Help
Entry
Rpdx1_2708 CDS
T01381
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00260
Glycine, serine and threonine metabolism
rpx00460
Cyanoamino acid metabolism
rpx00630
Glyoxylate and dicarboxylate metabolism
rpx00670
One carbon pool by folate
rpx00680
Methane metabolism
rpx01100
Metabolic pathways
rpx01110
Biosynthesis of secondary metabolites
rpx01120
Microbial metabolism in diverse environments
rpx01200
Carbon metabolism
rpx01230
Biosynthesis of amino acids
rpx01240
Biosynthesis of cofactors
rpx04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rpdx1_2708
09102 Energy metabolism
00680 Methane metabolism
Rpdx1_2708
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rpdx1_2708
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Rpdx1_2708
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Rpdx1_2708
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Rpdx1_2708
Enzymes [BR:
rpx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Rpdx1_2708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ADU44294
UniProt:
E6VIH6
LinkDB
All DBs
Position
2894575..2895879
Genome browser
AA seq
434 aa
AA seq
DB search
MGSSVAPHLVQTIANPGVSAAGLTAADHAVAAAIAEEETRQRDSIELIASENFVSRAVLD
AQGSVLTNKYAEGYPHRRYYGGCANVDAVEDLAIARVNELFGSAYANVQPHSGSQANQAV
FLALLSPGDTILGLDLKAGGHLTHGATVNMSGRWFRAVSYGVDPESHRIDMDRVAELARQ
HRPRLLIAGGSAYPRIMDFVHFRQIADEVGAMLMVDMAHFAGLVAGGVYPSPVPFADVVT
STTHKTLRGPRGGFVLTNDPDIAKKINSATFPGLQGGPLMHVIAGKAVAFGEALQPEFRL
YAQAVVENCRVLAQALADGGLTITSGGTDCHLAVVDLRPLGVTGNIAEQALESVGITVNK
NAIPNDPEKPMVTSGVRVGTAAGTSRGFGADQYRQIAGLLLDTLHAVRAGTLDADRQAIK
SRVRQLVARFPLPY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatccgtcgcgccgcacctcgtccagaccatcgcaaacccgggcgtgagcgcc
gccggcctgaccgcggccgatcacgctgttgcggccgcgatcgccgaggaggaaacccgc
cagcgcgactcgatcgagctgatcgcctcggagaacttcgtcagccgggcagttctcgac
gcgcaaggatcggtgctgaccaacaaatacgccgaaggctatccgcatcgtcgctactac
ggcggttgcgcgaatgtggacgcggtcgaggatctggcgattgcgcgggtcaatgagctg
ttcggcagcgcctacgccaacgtccagccgcattcgggcagccaggccaatcaggcggtg
tttctcgcgctgctgtcacccggcgataccatcctcggcctggacttgaaggccggcggc
catctgacccatggggcgacggtcaacatgtcgggccgctggttcagggccgtcagctat
ggcgtcgatccggagtcgcaccggatcgacatggatcgggtcgccgagctagctcgccag
caccggccacggctgctgatcgccggcgggtcggcgtatccgcggatcatggatttcgtc
cacttccgtcagatcgccgatgaggtcggggcgatgctgatggtcgatatggcccatttc
gccgggctcgtggccggcggcgtctatccgtcgcccgttccgttcgccgatgtcgtcacc
tcgacgacgcacaagacactccgtgggccgcgcggcggattcgttctgaccaatgatccg
gacatcgccaagaagatcaattcagcgacgttccccgggcttcagggcggtccgctgatg
catgtgatcgccggcaaggcggtcgcattcggcgaggcgctgcaaccggagttcagactg
tatgcgcaggccgtagtcgagaattgccgcgtgttggcgcaggcgctggcggatggcggg
ctgacgatcacgtcgggcggcaccgattgccatctcgccgttgtcgatctgcggcccctc
ggcgtgaccggcaatatcgccgagcaggccttggagtcggtggggatcacggtcaacaag
aacgcaatcccgaacgatccggagaagccgatggtgacgtcgggggtccgcgtagggacg
gcggccggcacctcccgcggcttcggcgcggatcagtatcgccagatcgccggcctgctg
ctcgacacgctccacgcggtccgcgccggaacgctggatgctgaccggcaagcgatcaag
tcgcgcgttcggcaactcgtcgcacgctttccgctaccttactga
DBGET
integrated database retrieval system
