Rhodopseudomonas palustris DX-1: Rpdx1_2815
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Entry
Rpdx1_2815 CDS
T01381
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rpdx1_2815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpx03021
]
Rpdx1_2815
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_2815
Enzymes [BR:
rpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rpdx1_2815
Transcription machinery [BR:
rpx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rpdx1_2815
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rpdx1_2815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
ADU44398
UniProt:
E6VJF2
LinkDB
All DBs
Position
complement(3002674..3003066)
Genome browser
AA seq
130 aa
AA seq
DB search
MARVTVEDCIDKVDNRFDLVLLAAHRARMISSGSPLTIDRDNDKNPVVSLREIADQTISP
EDLKEELVHSLQKFVEVDEPEQDTVPLIGSAGASVDADDTEVAMERMTEEELLKGLEGLA
PPEEQPEEDE
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgtcaccgtggaagattgcattgacaaggtcgacaaccggttcgacctcgtg
ctgttggcggctcatcgcgcgcgtatgatctcgtccggctcgccgctgacgatcgatcgc
gacaacgacaagaatcccgttgtttcgcttcgcgaaatcgccgaccagacgatttccccc
gaagatctcaaggaagagctggtgcactcgctgcagaagttcgtcgaggtcgacgagccg
gagcaggataccgttccgctgatcggttccgccggtgccagtgtcgacgccgacgacacc
gaggtcgccatggagcggatgaccgaagaagagctgctgaagggtctggaaggcttggcg
ccccccgaagagcagcccgaggaagacgaataa
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