Rhodopseudomonas palustris DX-1: Rpdx1_2914
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Entry
Rpdx1_2914 CDS
T01381
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00550
Peptidoglycan biosynthesis
rpx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rpdx1_2914
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rpx01003
]
Rpdx1_2914
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpx01011
]
Rpdx1_2914
Enzymes [BR:
rpx01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Rpdx1_2914
Glycosyltransferases [BR:
rpx01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Rpdx1_2914
Peptidoglycan biosynthesis and degradation proteins [BR:
rpx01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Rpdx1_2914
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
DUF6480
Motif
Other DBs
NCBI-ProteinID:
ADU44497
UniProt:
E6VL02
LinkDB
All DBs
Position
complement(3114777..3116972)
Genome browser
AA seq
731 aa
AA seq
DB search
MSVAPTPPRSSCPGSSRASTPDSSTAKDVDGRDKPGHDGRRGWSWLKRGAIVSAVAVVAV
VGGLIAYAVSLGPLPLDEARQTSVTVVDRHGKLLRAFAMADGRWRLPVDAATEVDPRYLK
LLLAYEDKRFWSHHGIDPLAVGRAALQLVSHGRIVSGGSTITMQLARLMEPRRERSVGAK
LRQMVRAVELQHRLSKQQILDLYLALAPYGGNLEGIRAASIAYFGKEPKRLTLAEAALLV
ALPQSPEHRRLDRHPDVAREARDRVLARMVEDGVVSAEDAAQARAVPMLRQRKPMPILAP
HSADQAVAIDKAAALIRLTLDAGLQRALETLARDRAAALGPDISIGIVAVDNTSGEVLAH
VGSADYFDDRRAGQVDMTRAVRSPGSTLKPFIYGLAFEDGFVHPESLIDDRPVRFGAYAP
ENFDMTFQGTVPVRKALQLSLNVPAIALLDRVGAARLTSRLKQAGTELVLPKDEVPGLAM
GLGGVGVKLIDLVQLYSALPRLGSVLPLREISRSGNDKRETLRLMDQVAAWQVGNVLLGT
PPPENAARSQIAFKTGTSYGYRDAWSVGFDGRMTIGVWVGRPDGAPVPGMIGRVAAAPVL
FDAFARSGHLRAPLPKAPRGTLVASNAKLPLPLRRFRPAGDLMQAGDDKALRIQFPLNGS
RIDAVSEASVGALPVKVAGGVLPMTVMVNGLSVGELDGRRQRLIAPPGPGFVRLTVMDAA
GATDTVVVRIQ
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggcacccacaccaccacgatcgtcatgcccgggctcgtcccgggcatccacg
cctgactcgtcgacggcgaaagacgtggatggccgggacaagcccggccatgacgggcgg
agaggatggtcgtggctcaagcggggcgctatcgtatcggcggttgcggtcgttgcggtg
gtcggcgggcttatcgcctacgccgtctcgctcggcccgctgccgctcgacgaggcgcgg
cagacgtcggtgacggtggtcgaccgccacggcaagctgctgcgggcgttcgcgatggcc
gacgggcgctggcggctgcccgtcgacgcagccaccgaagtcgatccgcgctacctgaag
ctgctgctcgcctacgaggacaagcggttctggtcgcatcacggcatcgatccgctggcg
gtcgggcgcgccgcgctgcagctcgtcagccacggccggatcgtgtccggcggttcgacc
atcaccatgcagctcgcgcggctgatggagccgcgccgcgagcgctcggtcggcgccaag
ctgcggcagatggtgcgggcggtcgaattgcagcatcggctgtcgaagcagcagatcctc
gacctgtatctggcgctggcaccgtatggcggcaatctcgaaggcatccgcgccgcgtcg
atcgcctatttcggcaaggagccgaaacggctgacgctggcggaagcggcgctgctggtg
gcgctgccgcaatcgcccgagcatcgccggctcgaccgccatccggacgtggcccgcgag
gcgcgcgaccgggtgctggcgcggatggtcgaagacggcgtggtcagcgctgaggatgcg
gcgcaggcgagggcggtgccgatgctgcgtcagcgcaagccgatgccgattctcgcaccg
cattcggccgaccaagcggtggcgatcgacaaggctgcggcgctgatccggctcacgctc
gacgccggcctgcaacgcgccctcgaaaccctggcgcgcgaccgcgccgctgcgctcggg
cccgatatctcgatcggcatcgtggcggtcgacaataccagcggcgaggtgctcgcccat
gtcggttcggcagattatttcgacgatcgccgcgccggccaggtcgacatgacccgggcg
gttcgctcgcccggctcgaccttgaagccgttcatctacggcctcgccttcgaggacggc
ttcgtccaccccgaaagtctgatcgacgaccggccggtgcggttcggcgcctatgcgccg
gaaaatttcgacatgacgttccagggcaccgtgccggtgcgcaaggcgctgcaattgtcg
ctcaacgtcccggcgatcgcattgctcgaccgggtcggtgcggcgcgcctgacctcacgg
ctgaagcaggccggcaccgagctggtgctgcccaaggacgaggtgccgggattggcgatg
gggctcggcggcgtcggcgtgaagctgatcgacctggtgcagctctacagcgcgctgccg
cgcctcggcagcgttctgccgctgcgtgaaatttccaggtccggcaatgacaagcgcgag
actctgcgcctgatggatcaagtcgcggcctggcaggtcggcaacgttctgctcggcacc
ccgccgccggagaacgcggcgcgcagccagatcgcgttcaagaccggcacctcctacggc
taccgcgacgcctggtcggtcgggttcgacggccggatgacgatcggggtctgggtcggg
cggccggacggggcgccggtgcccgggatgatcggacgcgtcgccgcggcgccggtgctg
ttcgacgcgttcgcacgcagcgggcatctgcgggcaccgctgccgaaggcgccgcggggg
acgctggtcgccagcaacgccaagctgccgctgccgctccgccggtttcggccggcaggc
gacctgatgcaagccggcgacgacaaggcgctgcggatccagtttccgctgaacggttca
cggatcgatgcggtcagcgaagcgtcggtcggcgcgctgccggtgaaggtcgccggcggg
gtgctgccgatgaccgtgatggtcaacggactgtcggtcggcgagctcgacggacggcgg
caacggctgatcgcgccgcccggtccggggttcgttcggctcaccgtgatggacgctgct
ggcgccacggacacagttgtcgtcagaattcaatag
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