KEGG   Rhodopseudomonas palustris DX-1: Rpdx1_3030
Entry
Rpdx1_3030        CDS       T01381                                 
Name
(GenBank) DNA topoisomerase IV, B subunit
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
rpx  Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:rpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpx03032]
    Rpdx1_3030
   03036 Chromosome and associated proteins [BR:rpx03036]
    Rpdx1_3030
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rpx02048]
    Rpdx1_3030
Enzymes [BR:rpx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Rpdx1_3030
DNA replication proteins [BR:rpx03032]
 Prokaryotic type
  DNA Topoisomerases
   Rpdx1_3030
Chromosome and associated proteins [BR:rpx03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Rpdx1_3030
Prokaryotic defense system [BR:rpx02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Rpdx1_3030
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c FliP
Other DBs
NCBI-ProteinID: ADU44611
UniProt: E6VLZ1
LinkDB
Position
3218092..3220140
AA seq 682 aa
MAKALKASSKSKSASDLFGAAPSAAPKPAAKPSGAEDGYTAADIEVLEGLEPVRRRPGMY
IGGTDEKALHHLFAEVIDNSMDEALAGHATFIEVELAADGFLTVSDNGRGIPVDPHPKFP
KKSALEVIMCTLHAGGKFDSKVYETSGGLHGVGVSVVNALSSRLEVEVARNQQLSRMVFE
RGHPKGKLESLGKVNNRRGTRVRFKPDTEIFGAKAAFKPQRLFKMARSKAYLFGGVKIRW
KCDPELLKGIEDVPAEDEFHFPGGLKDFLGAAIHNDTLVHPDIFAGKAGRNGAHGACEWA
VAWTADADGFLSSYCNTVPTPDGGTHESGLRSALLRGLKDHAERAGQGKRASSITSEDVM
VGAAIMLSVFVREPEFQGQTKDRLATAEAQKIVEQAIKDPFDHWLSGNPVQANKLLDFVV
ERAEERLRRRQEKEISRKTAVKKLRLPGKLADCTSTAAEGSELFIVEGDSAGGSAKQARD
RKTQAVLPLRGKILNVASAGKDKVVANAQLSDLIQALGAGTGVNYREEDLRYSRIIIMTD
ADVDGAHIASLLITFFYRQMPKLIDEGHLYLAVPPLYRLTHGAKTVYARDDAHKEELLKK
EFNANAKVDVGRFKGLGEMMPTQLKETTMDPAKRTLLRVVLLADDRDGTANSVERLMGTK
AEARFAFISEKAEFASEEMLDV
NT seq 2049 nt   +upstreamnt  +downstreamnt
atggccaaggcattgaaggcaagctcgaaatcgaaatccgccagcgacctgttcggggcc
gcgccgtccgccgcgcctaaaccggcggcgaagccgagcggcgctgaggacggctatacc
gccgcggacatcgaggtgctggaggggctggagccggtccggcgccgccccggcatgtat
atcggcggcaccgacgagaaggcgctgcaccatctgttcgccgaggtgatcgacaactcg
atggacgaagcgctggccggccacgccaccttcatcgaggtcgagctcgctgccgacggc
ttcctcaccgtgtccgacaatgggcgcggaattccggttgatccgcatccgaaatttccg
aagaagtcagcgctcgaagtgatcatgtgcacgctgcacgccggcggcaagttcgacagc
aaggtgtacgagacctcgggtggtctgcacggcgtcggtgtcagcgtcgtcaatgcgttg
tcgtcgcgtcttgaagtcgaagtggcgcgcaaccagcagctcagccgcatggtgttcgag
cgcggccatcccaagggcaagctggagagtctcggcaaggtcaacaaccgccgcggcacg
cgcgtccgcttcaagcctgacaccgagatcttcggcgccaaagccgcgttcaagccacag
cggctgttcaagatggcgcggtcgaaggcatatctgttcggcggcgtgaagatccgctgg
aagtgcgatcccgaactcctcaagggcatcgaggacgttccggccgaggatgaatttcat
tttcccggtggcctgaaggacttcctcggcgcggcgatccacaacgacaccctggtgcac
cccgacatcttcgccggcaaagccggtcgcaacggcgcccatggcgcctgcgaatgggcg
gtcgcctggacggccgatgccgacggcttcctgtcgtcctactgcaacaccgtgccgacg
cccgacggcggcactcacgagtccggcctgcgcagcgccctgctccgcggcctgaaggac
cacgccgagcgcgccggccagggcaagcgcgcctcgtcgatcacctcggaagacgtgatg
gtcggcgccgcgatcatgctcagcgtgttcgtgcgcgagccggaattccagggccagacc
aaggaccgcctcgccaccgccgaagcccagaagatcgtcgagcaggcgatcaaggatccg
ttcgaccactggctgtcgggcaatccggtgcaggccaacaagctgctcgacttcgtcgtc
gagcgcgccgaggaacggctgcgccgccgccaggaaaaggaaatctcgcgcaagactgcg
gtgaaaaagctgcggctgcccggcaagctcgcggactgcacctcgaccgcggccgaaggc
tccgaactgttcatcgtcgagggcgactcggccggcggcagcgccaagcaggcgcgcgac
cgcaagacgcaagctgtgctccccttgcgcggcaagattctcaacgtcgcctccgccggc
aaggacaaggtggtggccaacgcccagctctccgacctgatccaggcgctcggcgccggc
accggggtgaactaccgcgaggaagatctgcgctattcgcgcatcatcatcatgaccgac
gccgacgtcgacggcgcccacatcgcctcgctgctgatcacgtttttctaccggcagatg
ccgaagctgatcgacgagggccacctctatctcgcggtgccgccgctgtaccgcctgacc
cacggcgccaagacggtgtacgcccgcgacgacgcccacaaggaagagctgctgaagaag
gagttcaacgccaatgccaaagtcgatgtcggccgcttcaaaggcctcggcgagatgatg
ccgacgcagctcaaagagacaacgatggatccggccaagcgcactttgctgcgcgtcgtg
ctgctcgccgacgaccgcgacggcaccgccaattcggtcgaacggctgatgggcaccaag
gccgaagcccgcttcgccttcatctccgaaaaggccgagttcgccagcgaggagatgctg
gacgtctag

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