Rhodopseudomonas palustris DX-1: Rpdx1_3060
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Entry
Rpdx1_3060 CDS
T01381
Name
(GenBank) cell wall hydrolase/autolysin
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Rpdx1_3060
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpx01011
]
Rpdx1_3060
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rpx03036
]
Rpdx1_3060
Enzymes [BR:
rpx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
Rpdx1_3060
Peptidoglycan biosynthesis and degradation proteins [BR:
rpx01011
]
Peptidoglycan biosynthesis and degradation
Amidase
Rpdx1_3060
Chromosome and associated proteins [BR:
rpx03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Rpdx1_3060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
AMIN
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
ADU44641
UniProt:
E6VM21
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Position
complement(3256960..3258270)
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AA seq
436 aa
AA seq
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MARRANHFVLFSAMVACAAASLCLMSGAIAPALAEPSASGVAPIPASFPIASDARIAGDD
NHTRLIVDLDTKVPLRAFALADPFRVVIDLPQINFRLPKGAGENGRGLIKAFRYGLVMPG
GSRIVLDLTGPAKIAKVEVLEPANGQPGRLVIDLESIDRSSFMQALQTAGSVAELRPSVA
GGDTTATVVRSAPLPKIEHDDPRPVVVIDPGHGGIDNGTQSADGVAEKTIVLDFAVALRD
RLAQQGKFRVVLTRADDTFIPLSDRVKVAREQSAALFVSIHADALPRREGDAQGATIYTL
SDKASDAEAQRLADAENKADAIGGVNLTEEPTEVADILIDLAQRETKAFSNRFAQQLMKD
MKATTRMHKRPLKSAGFRVLKAPDVPSVLIELGYVSNKADLQHLLSEQWRSKTVGAVANA
IESFLSKRVVSAGPPG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
ttggcacggcgcgcaaatcattttgttttgttcagtgcgatggttgcgtgcgctgcagca
tcgctgtgcctgatgtctggggcgatcgctccggccctcgccgagccgagcgcaagcggt
gtcgcgccgattccggccagttttccgatcgcatcggacgcgcgcatcgccggtgacgac
aatcacacccgcctgatcgtcgatttggataccaaagtgccgctccgtgcgtttgctctg
gcggacccttttcgtgtggtgatcgaccttccccagatcaatttcaggctgccgaagggg
gctggggaaaatgggcgcggcctgatcaaggcgttccgctacgggctggtgatgccgggc
ggctcgcgaatcgtgctcgatctcaccggaccggcgaagatcgccaaggtcgaggtgctt
gaaccggccaacggtcaaccggggcggctggtgatcgatctcgaatcgatcgaccgcagc
agtttcatgcaagccttgcagactgcggggagcgttgctgaactacggcccagcgtggcg
gggggcgatacgactgcgacggtggttcgcagcgcgccgctgcccaagatcgagcacgac
gatccgcgtccggtggtggtgatcgatcctggccatggcggcatcgacaacggtacccaa
tcggccgatggcgtcgcggaaaaaaccatcgtgctggatttcgccgtcgcactgcgcgac
cggctggcgcagcagggcaaattccgggtggtgctgacccgcgccgacgataccttcatt
ccgctgtccgaccgggtgaaggttgcgcgcgaacaatccgcggcgctgttcgtgtcgatc
cacgccgacgccctgccgcggcgcgagggcgacgcccagggggcgacgatctacaccctg
tcggacaaggcgtccgacgccgaggcacagcggctggccgatgcggaaaacaaggccgac
gcgatcggcggcgtcaatctcaccgaggagccgaccgaggtcgccgacatcctgatcgat
ctggcgcagcgcgagaccaaagccttctccaatcgattcgcccagcaattgatgaaggac
atgaaggccaccacccggatgcacaagcgtccgctgaaatcggccggcttccgggtgctg
aaggcgccggacgtcccatcggtgctgatcgagctcggctacgtctccaacaaggccgac
ctgcagcacctgctgtccgaacaatggcgcagcaagaccgtcggggcggtggcgaatgcg
atcgaatcgtttctgagcaagcgagtggtttcggccggcccgccgggctga
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