Rhodopseudomonas palustris DX-1: Rpdx1_3121
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Entry
Rpdx1_3121 CDS
T01381
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rpdx1_3121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpx03000
]
Rpdx1_3121
Transcription factors [BR:
rpx03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rpdx1_3121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA
AAA_2
GAF_3
AAA_16
bpMoxR
nSTAND3
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ADU44700
UniProt:
E6VMU8
LinkDB
All DBs
Position
3326957..3328582
Genome browser
AA seq
541 aa
AA seq
DB search
MTALDVDRHAEPEGLVDEFTHCFTGECRVNVLQILFRINQVLTQNADLATLVSIVLDGMR
QQMRMQRGVMMLYDHRSDAIFIHDSFGLTDEEKGRGIYAPGEGITGKVVETGKPIIIPRV
IDNPDFLDRTRAHNKGRKQDKLAFFCVPIVLAQKVLGTICAERVYMNQRLLKQDAELLAM
VASLIAPAVELYLIENVDKVRLEAENRRLKSELKQRFRPANIIGNSKPMQDVYAMVHKVA
STKATVLLLGESGVGKELVASALHYNSPVADGPFIKANCAALPEALAESELFGHERGAFT
SAIATHKGYFEQASGGTIFLDEVGELSLPTQAKLLRVLQERTFERVGGARSVKVDVRIIA
ATNRNLAEMVAAGTFREDLFYRLNVFPITIPPLRDRGSDVITLADHFVTTYSAEIGKPIR
RISTPAINMLMSYHWPGNVRELENVIERSVILAEEGVIHGYDLPPSLQTPTETGTGFSGT
LEDRVTAVEYEMIVEALKASNGNVGHAATALGLTRRMLGLRMDRHGLTYKTFRTAGLRPR
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgctcgatgtcgatcgacacgccgagcctgagggcctggtcgacgaattcacc
cactgttttaccggcgagtgccgggtcaacgtgctgcagatcctgtttcgcatcaatcag
gtgctgacacagaacgccgatctcgccactctggtgtcgatcgtgctcgacggcatgcgc
cagcagatgcggatgcagcgcggcgtgatgatgctgtacgaccaccgctccgatgcgatc
ttcatccacgacagtttcggactgacggacgaggaaaaaggccgcggcatctatgcgccc
ggcgagggcattaccggcaaggtcgtcgagaccggcaagccgatcatcatcccccgggtg
atcgacaacccggacttcctcgatcgcacccgcgcccacaacaagggccgcaagcaggac
aagctggcattcttctgcgtgccgatcgtgctcgcccagaaggtgctcggcacgatctgc
gccgagcgcgtctatatgaatcagcgcctgctgaagcaggacgccgagctgctcgccatg
gtcgcctcgctgatcgcgccggcggtcgaactctatctgatcgagaacgtcgacaaggta
cggctcgaggccgagaaccgtaggctgaaaagcgagctgaagcagcggtttcgcccggcc
aatatcatcggcaattccaagccgatgcaggacgtctacgccatggtccacaaggtggcc
tcgaccaaagcgaccgtgctgctgctcggcgaaagcggcgtcggcaaggagctggtcgca
agcgccctgcactacaacagcccggtggccgacggccccttcatcaaggcgaactgcgcg
gcgctgccggaagcgctcgcggaaagcgagttgttcgggcacgagcgcggcgccttcacc
agcgccatcgccacccacaagggctatttcgaacaggcctccggcggtacgatctttctc
gacgaggtcggcgagctcagcctgccgacccaggccaagctgctccgcgtgctgcaggaa
cggacgttcgaaagggtcggcggcgccagatcggtcaaggtcgacgtccggatcatcgcc
gccaccaaccgcaaccttgccgagatggtcgcggccggcaccttccgcgaagacttgttc
tatcggctcaacgtattcccgatcaccatcccgccgctgcgcgatcgcggctcggacgtg
atcaccctcgccgaccacttcgtcaccacctattcggccgaaatcggcaagccgatcaga
cggatctcgaccccggcgatcaacatgctgatgagctatcactggcccggcaacgtccgc
gagctggagaacgtgatcgaacgatcggtgatcctggccgaggaaggcgtgatccacggc
tacgacctgccaccctcgctgcagacgccgaccgagaccggcaccggcttcagcggcacg
ctggaggaccgcgtcaccgcggtcgaatacgaaatgatcgtcgaggcgctgaaagcctcc
aacggcaatgtcggccacgcggccacggcgctcggcctgacgcgccggatgctcggcctg
cgaatggatcggcacggcctcacctacaagacgttccgcaccgcaggactccggccgcgg
agctga
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integrated database retrieval system
