Rhodopseudomonas palustris DX-1: Rpdx1_3383
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Entry
Rpdx1_3383 CDS
T01381
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00061
Fatty acid biosynthesis
rpx00071
Fatty acid degradation
rpx01100
Metabolic pathways
rpx01212
Fatty acid metabolism
rpx02024
Quorum sensing
rpx04146
Peroxisome
Module
rpx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rpdx1_3383
00071 Fatty acid degradation
Rpdx1_3383
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rpdx1_3383
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpdx1_3383
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpx01004
]
Rpdx1_3383
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpx04147
]
Rpdx1_3383
Enzymes [BR:
rpx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rpdx1_3383
Lipid biosynthesis proteins [BR:
rpx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rpdx1_3383
Exosome [BR:
rpx04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rpdx1_3383
Exosomal proteins of breast cancer cells
Rpdx1_3383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADU44954
UniProt:
E6VC19
LinkDB
All DBs
Position
complement(3618707..3620311)
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AA seq
534 aa
AA seq
DB search
MTSLEATGGVPGPGRIGRVAIGDILRKSAKRFPNRIALTDGARQVSYDELERDANRFANA
LVARGLKPGAKISTICNNSVEFVKALFGIHRAGLVWVPINTMLGPDDMSFILDHAGVKVA
VIDDNLFGQPERRAALEARGIELIAVNLAGKAADTGLPTFDLLLDGQSEIEPEAAFDDRD
LAMIIYTSGTTSRPKGAMHGHLAVTMAAMSNAIEMHLSRNDGITGQFPLFHCAAHVVLLS
YLIVGGKMAIMRGFDPVACMEAIQRDKLSVFIGLPLMYQVILDHPRRKEFDLSSLRCCIY
TMAPMPRPLLERAIAELCPTFVQPSGQTEMYPATTMSQPDRQLERFGNYWGESTLVNETA
IMDDSGNLLGVGQIGEIVHRGPNVMLGYYKDPEATEAARKFGWHHTGDLALIDEHGEVLF
LDRKKDMIKSGGENVASVKIEETLLAHPAVMNAAVVGLPHPQWGEAVSGFVKLKPGAQAT
EAEIIEHCKKHLGGFQVPKLLRIVDEMPMTATGKLRKVELRNAFTDHFMLGQTG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtcttgaagcgaccggcggcgtgccgggaccggggcggatcggccgcgtggcg
atcggcgacatcttgcgcaaatcggcgaagcggtttccgaaccggatcgcgctgaccgac
ggcgcccgtcaggtcagctacgacgaacttgaacgcgacgccaaccgcttcgccaacgcg
ctggtggcgcgcgggctgaagccgggcgcgaagatctcgacgatctgcaacaactcggtc
gagttcgtcaaagcgctgttcggcattcaccgggcggggctggtctgggtaccgatcaac
accatgctgggtcccgacgatatgagcttcatcctcgaccatgccggggtgaaggtcgcg
gtgatcgacgacaatctgttcggccagccggagcgccgcgccgctctggaggcgcgcggc
atcgaactgatcgcggtcaatctggccggcaaggccgcggacaccgggctgccgaccttc
gatctgcttctcgacggtcaatccgagatcgagcccgaggcggcgttcgacgaccgcgat
ctggcgatgatcatctacacctcgggcaccacctcgcggccgaagggcgcgatgcacggc
cacctcgccgtgacgatggcggcgatgagcaacgccatcgagatgcacctgtcgcgcaac
gacggcatcaccgggcagtttccgctgtttcactgcgccgcccacgtcgtgctgctgtcc
tatctgatcgtcggcggcaagatggcgatcatgcgcggcttcgatccggtcgcctgcatg
gaggcgatccagcgcgacaagctctccgtcttcatcggcctgccgctgatgtatcaggtg
atcctcgatcatccgcggcgcaaggaattcgatctctccagcctgcgctgctgcatctac
accatggcgccgatgccgcggccgctgctggagcgtgcgatcgccgagctgtgtccgacc
ttcgtgcagccgtcggggcagaccgagatgtatccggcgacgacgatgtcgcagccggac
cgccagctcgaacgcttcggcaactactggggcgagtcgacgctggtcaacgagaccgcg
atcatggacgattccgggaacctgctcggcgtcggccagatcggtgagatcgtgcatcgc
ggccctaacgtgatgctcggttattacaaggatccggaggccacagaagcggcgcgaaag
ttcggctggcatcacaccggcgatctggcgctgatcgacgagcacggcgaggtgctgttc
ctcgaccgcaagaaggacatgatcaagtccggcggcgagaacgtcgcctcggtcaagatc
gaggagacgctgctggcgcatccggcggtgatgaacgccgcggttgtcggcctgccgcat
ccgcaatggggcgaggcggtgtccggcttcgtcaagctcaagcccggcgcgcaggcgacc
gaggccgagatcatcgaacactgcaagaagcatctcggcggcttccaggtgccgaagctg
ctgcgcatcgtcgacgagatgccgatgaccgcgaccggtaagctgcgcaaggtcgagctg
cgcaacgcgttcaccgatcacttcatgctcgggcagaccggatga
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