Rhodopseudomonas palustris DX-1: Rpdx1_3682
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Entry
Rpdx1_3682 CDS
T01381
Name
(GenBank) protein of unknown function DUF853 NPT hydrolase putative
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_3682
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Rpdx1_3682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
Hydrolase
AAA_10
AAA_30
AAA_25
FtsK_SpoIIIE
Zot
T2SSE
AAA_16
ResIII
TrwB_AAD_bind
AAA_19
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ADU45249
UniProt:
E6VFP8
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All DBs
Position
complement(3939685..3941295)
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AA seq
536 aa
AA seq
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MAATGIVSGDTEDKIFIGRGEQPAWLTLGLANRHGLVTGATGTGKTVSLQVMAEGFARAG
VPVFAADIKGDLSGIAEVGEAKDFILKRAQEIGLKFQPDQFTTVFWDVFGEQGHPVRATV
SEMGPLLLSRMLDLNDVQEGVLNVAFRVADDMGLPLMDMKDLRAMLDAIAPIAQKVAENG
DVNADIRQAAQSLGNVTKQTVGTIQRQLLVLENQGGEKFFGEPALQLKDFIRTDSQGRGL
VNILVADKLMSSPRLYATFLLWMLSELFEELPELGDPDKPKLVFFFDEAHLLFNDAPKPL
MDKIEQVVRLIRSKGVGVYFITQNPIDVPDRVLAQLGNRVQHALRAFTPRDQKAVAAAAD
TFRPNPKLDTAKAITELGKGEALVSFLEGNGTPAMVERVLVRPPAARIGPITPEERKAII
AASPVRGKYDTAIDSESAYEMLRARIEGKSGDADAEPGGGGILGQLGGLFSTVFGTNTPR
GKLTTGQVVARNVARTVATTVVGGVAAELGKKVGGSLGSSVGRSIVRGTLGGMLRR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaccggcatcgttagcggtgataccgaggacaagatttttatcggtagaggg
gagcagccggcctggttgacgctgggactcgccaatcgccacggcctggtcaccggcgct
accggcaccggcaaaaccgtatcgctgcaggtgatggccgaaggctttgcgcgcgccggc
gtgccggtgttcgccgccgatatcaaaggcgacctgtcgggcatcgccgaagtcggcgaa
gccaaggacttcattctgaagcgcgcccaggagatcgggctgaaattccagcccgaccag
ttcaccacggtgttctgggacgtgttcggcgagcagggccatccggtgcgcgccaccgtt
tccgagatgggaccgctgctgctgtcgcggatgctcgatctcaacgacgtgcaggagggg
gtgctcaacgtcgcgttccgtgtcgccgacgacatgggccttccgctgatggacatgaag
gatctgcgcgcgatgctcgatgcgatcgcgccgatcgcccagaaggtcgcggaaaacggc
gacgtcaatgccgatatccgccaggccgcgcagtcgctcggcaacgtcaccaagcagacc
gtcggcaccatccagcgtcagcttctggtcctggaaaatcagggcggcgagaaattcttc
ggcgagccggcgctgcagctcaaggatttcatccgcaccgacagccagggccgcggcctc
gtcaatattctcgtggccgacaagctgatgtccagcccgcggctgtacgcgactttcctg
ctgtggatgctgtcggagctgttcgaggagctgccggagctcggcgatcccgacaagccc
aagctggtgttcttcttcgacgaggcgcatctcttgttcaacgacgcgccgaagccgttg
atggacaaaattgaacaggtggtgcggctgatccgctccaagggcgtcggcgtgtacttc
atcacccagaatccgatcgacgtgccggaccgggtgttggcgcagctcggcaaccgggtg
cagcacgcgctgcgcgcgttcaccccgcgcgaccagaaggcggtggcggccgcggccgac
accttccggccgaaccccaagctcgataccgccaaggcgatcaccgagctcggcaagggc
gaagcgctggtgtcgttcctcgaaggcaacggcacgccggcgatggtcgagcgcgtgctg
gtgcggccgccggcggcgcggatcggaccgatcacgccggaggagcgcaaggcgatcatc
gccgcgagcccggtgcggggcaaatacgataccgcgatcgattccgaatccgcctacgag
atgctgcgtgcgcggatcgaaggcaaatccggcgacgccgacgcggagccgggcggtggc
ggcatcctcggtcagctcggcgggctgttctcgaccgtgttcggcaccaacacgccgcgc
ggcaagctcaccaccggccaggtggtggcgcgcaacgtcgcccgcactgtcgccaccacc
gtggtcggcggtgtcgcagccgaactcggcaagaaggtcggcggatcgctcggcagttcg
gtcgggcgctcgatcgtgcgtggcacgctcggcggcatgctgcggcggtga
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