Rhodopseudomonas palustris DX-1: Rpdx1_3965
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Entry
Rpdx1_3965 CDS
T01381
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpx03000
]
Rpdx1_3965
Transcription factors [BR:
rpx03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Rpdx1_3965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
CggR_N
Motif
Other DBs
NCBI-ProteinID:
ADU45521
UniProt:
E6VIU4
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All DBs
Position
4253576..4254544
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AA seq
322 aa
AA seq
DB search
MSRQFRTVSIRQLRALAALAETGSITAAAVKLNLTQPAVTLQLRNLQALADLPLIQRSSD
GMRLTDAGREVLALSERIEAAIAACETSLEMIAGKTAGRISIGAVSTAKYFVPFAISGFL
KRHPKIDVHLSIGNRQEIGAELRNYELDIAIMGRPPVDLEVDVHLIGDHPHVVIAPTAHR
LARKDGIAPAELASETFVTREPGSGTRSLMEQFFGGAGISPAIGMEMSSNETIKQAVIAG
LGIAFISAHTVATELDERRLVILDVEGLPVVRQWFVVSRRDKVLLPPARAMLDFLKAEGP
QFLPRTHGRLRLTRPSPRGKRG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacaattcaggaccgtctcgatccgccagctccgcgcgctggcggcgttggca
gagaccggcagcatcaccgcggcggcagtcaaattgaacctgacgcagccggccgtgacg
ctgcagctccgcaatctgcaggcgctcgccgatctgccgctgatccagcgcagcagtgac
ggaatgcggctgaccgacgccgggcgcgaagtgctggcgctcagcgagcggatcgaggcc
gcgatcgccgcgtgcgagacctcgctggagatgatcgccggcaagaccgcgggacggatt
tcgatcggcgcggtgtcgaccgcgaagtacttcgtgccgttcgcgatctcgggctttctc
aagcgtcatccgaagatcgacgtgcatctgtcgatcggcaatcgccaggaaatcggcgcc
gagctgcgcaactacgaactcgacatcgccatcatgggacgtccgccggtcgatctcgag
gtcgacgtccacctgatcggcgaccatccacacgtcgtcatcgcgccgaccgcacatcgg
ctggcccgcaaggacggcattgcgccggccgaactggcgagcgagaccttcgtgacccgc
gagcccggctcgggcacgcgcagcctgatggagcagttcttcggcggcgccggaatcagc
ccggcgatcggcatggagatgagcagcaacgagaccatcaagcaggcggtgatcgccggg
ctcggcatcgcattcatctcggcccacaccgtcgccaccgagctcgacgagcggcggctg
gtgattctggatgtcgaaggattgccggtggtgcggcagtggttcgtggtcagtcgtcgg
gacaaggtgctgctgccgccggcgcgggcgatgctcgacttcctgaaggccgaaggcccg
cagttcctgccgcgcacccacggccggctacggctgacccggccctcgccccgcggcaag
cgcggctga
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