KEGG   Rhodopseudomonas palustris DX-1: Rpdx1_4071
Entry
Rpdx1_4071        CDS       T01381                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rpx  Rhodopseudomonas palustris DX-1
Pathway
rpx00061  Fatty acid biosynthesis
rpx00071  Fatty acid degradation
rpx01100  Metabolic pathways
rpx01212  Fatty acid metabolism
rpx02024  Quorum sensing
rpx04146  Peroxisome
Module
rpx_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rpx00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Rpdx1_4071
   00071 Fatty acid degradation
    Rpdx1_4071
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    Rpdx1_4071
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rpdx1_4071
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rpx01004]
    Rpdx1_4071
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rpx04147]
    Rpdx1_4071
Enzymes [BR:rpx01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Rpdx1_4071
Lipid biosynthesis proteins [BR:rpx01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   Rpdx1_4071
Exosome [BR:rpx04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Rpdx1_4071
  Exosomal proteins of breast cancer cells
   Rpdx1_4071
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ADU45627
UniProt: E6VKE8
LinkDB
Position
complement(4369727..4371442)
AA seq 571 aa
MTVDAKEADYLAKLHALWAKAWPKGTPREPQYLHGEVALSEYLRAWAKSAPQRPAVIFYG
HVTTYADLDEQSDRFAALLMQKGVKKGDRVAVFLPNCPQFHIVFFGILKLGAIHVPVSPL
SRAFELSYELNDTDAEVIVALDQLAGVVEQVRAETSLREVIVTSFADVIPADPTIPVPDS
VSGPRIAVPGATDLLPALAALPKPEPLPPASLDDVAALNYTGGTTGMPKGCVHTQRDMVY
TAAANHGISVVADQNSVFLSFFPEFWIAGENFGLIFPMFTGATLVLLARWDALGVLSAIQ
RYKVNVTAMPVDGAVELMDHPRFKEFDLSSLSQVRVVSFVKKLNPTYRKRWKDLTGTILT
EAAWGMTETHTSNTFTAGFQGDDFDLVSQPIFVGLPVPGAEFKITDFETGELVPLGGEGE
IRVRTPSLLKSYWNKPEATAQSLVDGWLRTGDIGTIDSDGFLHFLGRRKEMLKVKGMSVF
PPEIEALLGQHPKVLGSGVVGRDDPGKGQVPVAFIQLKPEAEGTITPAELQAWCAERMAV
YKVPEIRIIDALPMTATGKVKKQELNANAPL
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgaccgtggacgccaaggaagccgactatctggcaaagctgcatgcgctatgggccaag
gcgtggcccaagggcacgccgcgcgagccgcaatatctgcacggcgaagtcgcgctcagc
gagtatctacgggcctgggcgaaatcggcgccgcagcggccggcggtgatcttctacggc
cacgtcaccacctatgcggatctcgacgagcagagcgacaggttcgcggcgctgctgatg
cagaagggcgtgaagaagggcgaccgggtcgcggtgttcctgccgaactgcccgcagttc
cacatcgtattcttcggcatcctcaagctcggtgcgatccatgtgccggtcagtccgctg
tcgcgggcgttcgagttgtcctacgagctcaacgataccgacgccgaagtcatcgtggcg
ctcgaccagctcgccggcgtggtcgagcaggtgcgcgccgagacctcgctgcgtgaagtg
atcgtcaccagcttcgcggacgtgatcccagccgatccgacgatcccggtgccggattcg
gtgagcggcccgcgcatcgccgttccgggcgcgacagacctgctacccgctctcgcggcg
ctgccgaagccggagccgttgccaccggcctcgctcgacgatgtcgcggcgctcaactac
accggcggcaccaccggcatgccgaagggctgcgtccacacccagcgcgacatggtctac
acggcggccgccaatcacggcatctcggtggtggccgatcagaacagcgtgttcctgtcg
ttcttccccgagttctggatcgcgggcgagaacttcggcctgatcttcccgatgttcacc
ggcgcgacgctggtgctgctggcgcggtgggatgcgctcggcgtgctgagcgcgatccag
cgctataaggtcaacgtcaccgcgatgccggtcgatggcgcggtcgaattgatggatcac
ccgcgcttcaaggagttcgatctgtcctcgctcagccaggtgcgggttgtgtcgttcgtc
aagaagctcaatccgacctatcgcaagcggtggaaggatctcaccggcacgattctcacc
gaagccgcgtgggggatgaccgagacccacacctccaacaccttcacggcaggctttcag
ggcgacgatttcgatctggtgtcgcagccgatcttcgtcggcctgccggtgccgggtgcg
gagttcaagatcaccgacttcgagaccggcgagctggtgccgctcggcggcgagggcgaa
atccgtgtgcgcacgccgtcgctgctcaagagctactggaataagccggaggcgaccgcg
caatcgctggtcgacggctggctgcgcaccggcgacatcggcaccatcgattccgatggc
ttcctgcacttcctcggccgacgcaaggagatgctcaaggtcaagggcatgagcgtgttt
ccgccggagatcgaggcgctgctcggtcagcatccgaaagtgctcggttcaggcgttgtg
ggccgcgacgatcccggcaagggccaggtgccggtcgccttcatccagctcaagccggaa
gccgaaggcaccatcacgccggccgagctgcaggcctggtgcgccgagcggatggcggtc
tacaaggttcctgagatccgtattatcgacgcgttgccgatgaccgcgaccggcaaggtg
aagaagcaagagctcaacgccaacgcgccgctgtga

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