Rhodopseudomonas palustris DX-1: Rpdx1_4087
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Entry
Rpdx1_4087 CDS
T01381
Name
(GenBank) cysteine desulfurase, SufS subfamily
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00450
Selenocompound metabolism
rpx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Rpdx1_4087
Enzymes [BR:
rpx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Rpdx1_4087
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Rpdx1_4087
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Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ADU45642
UniProt:
E6VKG3
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All DBs
Position
complement(4388059..4390038)
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AA seq
659 aa
AA seq
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MSTPEPTLPHPGSAALPQGGALPHPASLEQASAAAVGAPDVASIARLANAFFSALPTGAV
PEPGAALGSAPLFAAEPLHNAIPGTPALSPSYKPNHNPGAASPIPTVGAARPSAPIFALD
PNLAPEPTTAVGSLPQELKVPLAAPPVAPPPPSAPAVQPVFPRDTDLAALPGRLDESRSF
VPRSVLPSAGSFGANAAATAAPLYFLADNPALAHATPASAAPPRVDTFDLTGLAPQHRPD
VHVLDLSGARPFDANVFKRDFPILRETVNGRPLVWLDNGATTQKPQCVIDRLVQFYTHEN
SNIHRAAHTLAARSTDAYEAARDKVRGFINAPSVKDIVFVRGATEAINLVAQAWGRRNVG
EGDEIVVSHLEHHANIVPWQQLAAEKGARLRVAPVDDHGQILLDEYEKLLGPKTKIVAFT
QVSNALGTVTPVAEMTALAHRHGAKVLVDGAQGVCHMPVDVQALDVDFYAFSGHKMFAPT
GIGVLYGKADVLEAMPPWQGGGNMIADVTFEKTIFQGPPDRFEAGTGNIADAVGLGAAID
YLTRIGMANIAAHEHELLAYGTEHLLTVPGLKLIGTAREKAGILSFVLDGCRSEDVGKAL
DREGIAVRAGHHCAQPILRRFGLESTVRPSLALYNTHDDIDALVDALRRLQSGRGVRGN
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgcctgagccgaccctgccgcatccgggctcggcggctctgccgcaaggcgga
gcgctgccgcatccggcgtcgctggagcaggcgtccgccgcagcggtcggtgcaccggat
gtcgcctcgatcgcgcggctggccaacgcgttcttctcggcgttgccgaccggggcggtg
ccggagcccggcgccgcgctcggctcggcgccactgtttgccgccgagccgctgcacaat
gcgattccaggcacgccggcgctatcgccctcctataagccgaaccacaatcccggcgcg
gcctcgccgatccccaccgtgggcgcggcgcggccgtcggcaccgatcttcgcgcttgat
cctaatctggcgccggagccgaccacggcggttggctcgttgccgcaggagcttaaggtg
ccgctcgcggctccgcctgtggcgccgccgcctccgtctgcaccggcggtgcagcctgtg
tttccgcgcgatactgatctggccgcgctaccaggccggctcgacgaatcccgcagcttc
gtgccgcgcagcgtattgccgagcgcggggtcattcggggccaacgctgcggcgacggca
gctccgctgtattttctcgccgacaatccggccctggcccatgcgacgccggcatcagcc
gcgccgccccgtgtcgataccttcgacctcaccgggctggcgccgcagcatcgccccgac
gtgcatgtgctcgatctgtccggcgcgcggccgttcgacgccaacgtcttcaagcgtgat
ttcccgatcctgcgcgagaccgtcaacggtcggccgctggtgtggctcgacaacggcgcc
acaacgcagaagccgcaatgcgtgatcgatcggttggtgcagttctacacgcacgagaac
tccaacatccatcgtgccgcccacacgctggcggcacggtcgaccgatgcctatgaggcg
gcccgcgacaaggtgcgcggcttcatcaacgcgccctcggtgaaggatatcgtgttcgtg
cgcggcgccaccgaggcgatcaacctcgtggcgcaggcctggggccgccgcaatgtcggc
gaaggcgacgagatcgtggtgtcgcatctcgagcaccacgccaacatcgtgccgtggcag
caactcgccgccgagaaaggcgcgcgactgcgcgtcgctccggtcgacgatcacggccag
atcctgctcgacgaatacgaaaagctgctcgggccgaagaccaagatcgtcgcgttcacg
caagtctccaacgcgctcggcacggtcaccccggtcgccgagatgaccgcgctggcgcat
cgccacggcgccaaggtgctggtcgacggtgctcagggcgtctgccacatgccggtcgac
gtccaggcgctggatgtcgatttctacgccttctctggccacaagatgttcgcgccgacc
ggcatcggcgtgctgtacggcaaggccgatgtcctcgaagcgatgccaccgtggcagggt
ggcggcaacatgatcgccgacgtcaccttcgagaagacgatcttccaggggccgccggat
cggttcgaagccggcaccggcaatatcgccgatgcggtcggtcttggcgcggcgatcgat
tacttgacccgcattggcatggccaacatcgcggcgcacgagcacgagttgctcgcctat
ggcaccgagcatctgctgacggtgccgggcctcaagctgatcggcaccgcgcgcgagaag
gcaggcatcctgtcgttcgtgctcgatggctgccgcagcgaggatgtcggtaaggcgctc
gatcgcgaaggcatcgcagtgcgagccggccatcattgcgcccagccgatcctgcgccgg
ttcggtctcgaaagcacggtgcggccgtcgctcgccctttacaacacccatgacgacatc
gacgcgctggtcgacgcgttgcgccgactgcagagtgggcgaggtgtgcgcgggaactga
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