Rhodopseudomonas palustris DX-1: Rpdx1_4117
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Entry
Rpdx1_4117 CDS
T01381
Name
(GenBank) benzoate-CoA ligase family
KO
K04105
4-hydroxybenzoate-CoA ligase [EC:
6.2.1.27
6.2.1.25
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00362
Benzoate degradation
rpx00627
Aminobenzoate degradation
rpx01100
Metabolic pathways
rpx01120
Microbial metabolism in diverse environments
rpx01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rpdx1_4117
00627 Aminobenzoate degradation
Rpdx1_4117
Enzymes [BR:
rpx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.25 benzoate---CoA ligase
Rpdx1_4117
6.2.1.27 4-hydroxybenzoate---CoA ligase
Rpdx1_4117
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Paralog
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ADU45672
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All DBs
Position
4419021..4420640
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AA seq
539 aa
AA seq
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MPLRDYNAAVDFVDRNVAEGRGGKIAFIDPQRSLSYGELRDAVARVGPMLARLGVEQENR
IALVLKDTVDFPVLFWGAIRAGIVPVLLNTRLNADQYRYLLEDSRSKLVFASSEFLPAIE
EAAADLPHLRTIVAVGEAPSPTLQLADLLAAEQEGGAPAATCADDIAYWQYSSGTTGMPK
GVMHVHSSPRVMAENAGRRIGYREDDVVFSAAKLFFAYGLGNAMFCTMGIGATSVLYPER
PTADTVFDTLRLHRPTMLFAVPTLYAAMLADPRSRTEALPDRLRLCVSAGEPLPTQVGLN
WRNRFGRDIVNGVGSTEMGHLFLTNLPHAVEYGTSGVPVDGYRLRLVDESGQDVADDEIG
ELLVSGGSSAAGYWNQRDKTRTTFVGEWTRTGDKYYRRADGVYTYCGRTDDIFKVSGIWV
SPFEIEQALMSHAKVLEAAVIPAEDTDGLVKPKAFIVLESHAEIDPGALFDELKEHVKSA
IGPWKYPRWIQIMDDLPKTSSGKLQRYLLREMTLGEAEATESARSTSTLYGRATAGNAR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgccgctacgcgactacaacgcggcggtcgatttcgtcgatcgcaacgttgcggaaggc
cggggcggcaagatcgccttcatcgatccgcagcgcagcttgagttatggcgagctgcgc
gacgccgtcgcacgcgtcggcccgatgctggcgcgacttggggtcgagcaggaaaaccgc
attgcgctggtgctcaaggacactgtcgacttcccggtcctgttctggggcgcgatccgc
gccgggatcgttccggtgctgctcaacacccggctgaatgcagatcagtatcgctacctg
ctggaggattcgcgatccaagctggtgttcgcctcgtcggaattcctgccggcgatcgag
gaggccgcggccgatctgccgcatctgcgcacgatcgtcgcggtcggtgaagcgccgtcg
ccgaccttgcaactggccgatctgctcgccgccgagcaagagggcggtgcgcccgcggca
acctgtgccgacgacatcgcctattggcaatattcctccggcaccacgggaatgccgaag
ggcgtgatgcacgtgcattcgagtccgcgggtgatggcggagaacgccggccgccggatc
ggctaccgcgaagatgacgtggtgttttcggcggccaagctgttttttgcctatgggctc
ggcaacgcgatgttctgcaccatggggatcggcgccacctcggtgctgtaccccgagcgg
ccgaccgccgacacggttttcgacaccttgcggctgcaccggccgacgatgttgttcgct
gtgccgacactttatgccgcaatgctggccgatccgcgctcgcgcaccgaggcgctcccg
gaccggctgcgcctgtgcgtctctgccggcgagccgctgccgacgcaggtcgggctcaac
tggcgcaatcgtttcggccgcgacatcgtcaacggagtcggctcgaccgagatgggccac
ctgttcctgaccaacctcccacacgccgtggaatacggaacgtcgggagtaccggtcgac
ggctatcgactgcggctggtcgacgagagcggccaggacgtcgccgacgacgagatcggc
gaattgctggtgagcggcggatcgtcggccgcgggctactggaatcagcgcgacaagaca
cgaacaaccttcgtcggtgagtggacccggaccggagataaatactaccggcgcgccgac
ggcgtttacacctattgcgggcgaaccgacgacatcttcaaagtcagcggcatctgggtg
tcaccgttcgaaatcgaacaggcgctgatgagtcacgccaaggtgctggaagccgcggtg
attccggccgaggacaccgatgggctggtgaagccgaaagcgttcatcgtgctggagtcg
cacgccgaaatcgatcccggcgcgctgttcgacgaactgaaggagcacgtcaagtctgcg
atcgggccatggaaatatccgcgctggattcagatcatggacgatctgccgaagacgtcg
agcggcaagctgcagcgctatctgctgcgcgagatgacgctcggcgaagctgaagccacg
gaaagcgcgcgttccacttccacgctttacgggcgggccaccgccggcaacgcacgatga
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