Rhodopseudomonas palustris DX-1: Rpdx1_4162
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Entry
Rpdx1_4162 CDS
T01381
Name
(GenBank) DNA primase
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rpdx1_4162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpx03032
]
Rpdx1_4162
Enzymes [BR:
rpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
Rpdx1_4162
DNA replication proteins [BR:
rpx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rpdx1_4162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
Toprim_4
Toprim_2
Toprim
Toprim_3
DnaB_bind
Helicase_C_2
Paratox
DUF5946
Motif
Other DBs
NCBI-ProteinID:
ADU45716
UniProt:
E6VLB2
LinkDB
All DBs
Position
complement(4479689..4481695)
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AA seq
668 aa
AA seq
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MRFSPQFLDDLKARLSVSEVVGRRVKLKKAGREWKGLSPFQQEKTPSFFVNDEKQAWFDF
SSGKNGSIFDFVMLTEGVDFPEAVERLAAMAGVALPVQTQESARQEQRRKSLYDVMELAA
NYFADNLASRAGARARGYLADRAILPGTQVKFRLGYASNERFALKEHLGKHGVPVADMIE
AGLLSAGPDIPVPFDKFRDRVMFPILDLRGRVIAFGGRALEKDVAAKYLNSPETPLFHKG
DNLYNHAPARKAAHEGGSVIVVEGYVDVIALVTVGFPATVAPLGTALTEAQLQHLWKMAD
EPILCFDGDRAGQKAAYRAADLALPHLKPGKSLRFALLPEGQDPDDLARAGGRLAVDEVI
SAARPLADMLWAREAEGGMFATPERRAALEARINELSNGIRDEIVRRHYRQDLTDRLRAA
FAPAGGFGGFGGGFRGGGGGDSGRRFAPRGGFPQGGGRFAPRGRPGQPAPTLGRGPYQIA
SPDLISSPIMRGQRSAMSRREALILISLLNHPWLLDDHLEEIAALEFAHPEAHRLRAAII
AAFAQHHHRGDDPAGQAEKLRADLVKAGLSEQLQRVERAITTSAVWAVGPAAAREDVLST
WQQLVALHRQSHSLLRELKDAELALGDDGSEANMQWLNDVKARLAQVEGTEALIEGFGES
SGRFQRSV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttctcgccgcagttcctcgacgatctgaaagcccggctgtcggtgtcggaggtg
gtcggccgtcgcgtcaagctgaagaaggccgggcgggagtggaaggggctgtcgccgttc
cagcaggagaagacgccgtcattcttcgtcaatgacgagaaacaggcgtggttcgacttc
tcctcgggcaagaacggctcgatcttcgatttcgtgatgctgaccgagggcgtcgacttc
cccgaagcggtcgagcggctggcggcgatggccggcgttgcgctgccggtgcagacgcaa
gaatccgcgcgccaggagcagcgccgcaaatcgctgtacgacgtgatggagctggcggct
aattacttcgccgacaatctcgcctcacgcgccggcgcccgcgcccgcggctatctggcc
gaccgcgcgattctgccgggcacccaggtcaagttccggctcggatatgcgtcgaacgag
cgctttgcgctgaaggagcatctcggcaagcacggcgtgccggtggccgacatgatcgaa
gcggggctgttgtcggcgggccctgatattccggtgccgttcgacaagttccgcgaccgg
gtgatgtttccgattctggatctgcgcggccgggtgatcgcgttcggcggccgcgcgctg
gagaaggatgtcgcagcgaagtatctgaactcgcccgagacgccgctgtttcacaagggc
gacaacctctacaaccacgcgcccgcgcgcaaagccgcgcatgaaggcggttcggtgatc
gtggtcgaaggctatgtcgacgtcatcgcgctggtcacggttggtttccccgcaaccgtc
gcgccgctcggcaccgcgctgaccgaggcgcagcttcagcacctctggaaaatggccgac
gagccgatcctgtgcttcgacggcgaccgcgccggccagaaggcggcgtatcgcgccgcc
gatctggcgctgccgcatctgaagcccggcaagagcctgcgctttgcgctgctccccgaa
ggacaggatcccgacgatctcgcccgcgccggcggccggctcgcggtggacgaagtgatc
agcgcggcacggccgctcgccgacatgctgtgggcgcgcgaggccgaaggcgggatgttc
gccaccccggagcggcgcgccgcgctggaggcgcggatcaacgagctgtcgaacggcatc
cgcgacgagatcgtgcgccggcactatcgccaggatctcaccgaccgtctgcgcgcggcg
ttcgcgcccgccggcggctttggcggattcggtggcggcttccgcggtgggggcggcggt
gattcggggcggcggttcgccccgcgcggcggttttccacaggggggcggccgatttgcc
ccgcgcgggcgtccgggacaaccggcgccaacgctcggccggggcccctaccagattgcc
agcccggacctgatttcgagcccgatcatgcgcggccagcgctcggcgatgtcgcgccgc
gaggccctgatcctgatctcgctgctcaatcatccctggctgctcgacgaccatctggag
gaaatcgccgcgctggaattcgcccatccggaggcgcaccgcctgcgggcggcgatcatc
gccgccttcgcccagcatcaccaccgcggcgacgatccggccggtcaggccgaaaagctc
cgcgcagatttggttaaggcaggcttatccgagcaattgcaaagggttgagcgggcgatc
acgacctcggcggtgtgggcggtcggtcctgcggcggcgcgcgaggacgtcctttcgacg
tggcagcaactcgttgccttgcatcgacaatcccactccttacttagggaattgaaggat
gccgagctggccttgggtgacgacggcagcgaggcgaacatgcagtggctgaacgacgtc
aaggcgcgcctggcgcaggtcgagggcaccgaggctctgatcgagggattcggcgaatcc
tccggccggttccagcgcagcgtgtga
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