Rhodopseudomonas palustris DX-1: Rpdx1_4810
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Entry
Rpdx1_4810 CDS
T01381
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rpdx1_4810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpx03000
]
Rpdx1_4810
Transcription factors [BR:
rpx03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rpdx1_4810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
AAA
Mg_chelatase
AAA_2
bpMoxR
MCM
AAA_16
AAA_3
AAA_30
TIP39
AAA_7
TIP49
DUF815
HALZ
Motif
Other DBs
NCBI-ProteinID:
ADU46355
UniProt:
E6VEV2
LinkDB
All DBs
Position
complement(5163853..5165607)
Genome browser
AA seq
584 aa
AA seq
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MAQREIRLVENEYPSQSMTHPPIPLSDIALTGIFEISKILTSPARLEITLANVVNLLQSF
LQMRNGVVSLLADDGVPDITVGVGWNEGSDNRYRARLPQKAIDQIVATAVPLVADNVSSH
PMFTAADALALGATDEIRVSFIGVPIRIDSRVVGTLSIDRVRDGRSHFRMDADVRFLTMV
ANLIGQTVKLHRVVTRDRERLMAESHRLQKELSELKPERERKRVKVDGIVGESPAIRKLL
AKVSIIAKSQSPVLLRGESGTGKELIAKAIHELSARANGPFIKINCAALPESVLESELFG
HEKGAFTGAIASRKGRFELADKGTLFLDEIGEISASFQAKLLRVLQEQEFERVGGNQTIK
VNVRIVAATNRNLEEAVARKEFRADLYYRINVVPMILPPLRDRPTDIPLLATEFLKNFNK
ENGRELSFEQHALDLLKACSFPGNVRELENCVRRTATLAVGPDIRDSDFACHQDECLSAI
LWKGHTEPVPERPRPEIPLQVLPRKAPVEIVHPREPVASADDFAPTPVRSEMPSDESNMS
ERERLINAMERAGWVQAKAARILGLTPRQIGYALKKHNIELKHF
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcgcgaaatccgccttgtcgaaaacgagtatccgtcgcaatcgatgacccat
cccccaataccgctgagtgatatcgcgctcaccggcattttcgagatttcgaaaatcctc
acctccccggcgcggctggagatcactctcgccaacgtcgtcaacctgctgcagtcgttt
ttgcagatgcgtaatggcgtggtgtcgctgctcgccgacgacggcgtgcctgatattacc
gtcggcgtcggctggaacgagggcagcgacaatcgctaccgcgcccggttgccgcagaag
gcgatcgaccagatcgtcgccaccgcggtcccgctggtcgccgacaatgtctccagccac
ccgatgttcaccgccgccgacgcgctggcgctcggcgccaccgacgagatccgggtgtcg
ttcatcggggtgccgatccggatcgattcgcgggtggtaggcacgctgagcatcgatcgc
gtccgtgacggccggtcgcatttccggatggacgccgacgtccgctttctcaccatggtg
gccaacctgatcggccagaccgtgaagctgcatcgggtggtgacgcgcgaccgcgagcgg
ctgatggcggaaagccaccggctgcagaaggaactgtccgagctgaagcccgagcgcgag
cgcaagcgggtcaaggtcgacggtatcgtcggcgagagcccggcaatcaggaagttgctg
gccaaggtcagcattattgcgaagtcgcagtcaccggtgttgctgcgtggcgagtccggc
accggcaaggagctgattgccaaagcgatccacgaattgtcggcgcgcgccaacggccca
ttcatcaagatcaactgcgcggcgctgccggaatcggtgctggaatccgaactgttcggt
cacgagaagggggcgttcaccggtgcgatcgcctcgcgcaaggggcggttcgaactcgcc
gacaagggcacgctgtttctcgacgagatcggcgagatctcggcctcgtttcaggccaag
ctgctgcgcgtgctccaggaacaggaattcgagcgggtcggcggcaatcagaccatcaag
gtcaacgtccggatcgtcgccgccaccaaccgcaatctggaagaagcggtggcgcgcaag
gaattccgcgccgacctgtactaccgcatcaacgtggtgccgatgatccttccgccgctg
cgcgaccggcccaccgacatcccgctgctggcgaccgaattcctgaagaacttcaacaag
gagaacgggcgcgagctgtctttcgagcagcacgcgctggatctgctgaaagcctgctcg
ttccccggcaatgtccgcgagctggagaattgcgtgcgccggactgcgacccttgcggtg
ggccccgacattcgcgacagcgatttcgcctgtcatcaggatgaatgcctgtcggcgatc
ctgtggaaggggcacaccgagcccgtgcccgaacgcccccgcccggagattccgttgcag
gtattgccgcgcaaagctccggtggagatcgtgcatccgcgcgagccggtcgcatcagca
gatgattttgcgccgacgccggtccgctcggagatgccgtccgacgaatcgaacatgtcg
gagcgcgagcggctgatcaatgcgatggagcgcgccggctgggtgcaggcgaaggccgcc
cgcattctcggcctcacgccgcgccagatcggctacgcgctgaagaagcacaacatcgag
ctcaagcacttctga
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