Rhodopseudomonas palustris DX-1: Rpdx1_4937
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Entry
Rpdx1_4937 CDS
T01381
Name
(GenBank) alpha amylase catalytic region
KO
K01187
alpha-glucosidase [EC:
3.2.1.20
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00052
Galactose metabolism
rpx00500
Starch and sucrose metabolism
rpx01100
Metabolic pathways
rpx01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Rpdx1_4937
00500 Starch and sucrose metabolism
Rpdx1_4937
Enzymes [BR:
rpx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.20 alpha-glucosidase
Rpdx1_4937
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
Alpha-amylase_C_2
Complex1_LYR
Malt_amylase_C
GHL5
Motif
Other DBs
NCBI-ProteinID:
ADU46478
UniProt:
E6VG19
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Position
complement(5309097..5310713)
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AA seq
538 aa
AA seq
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MQTVASVSWWAAGVLYQIYPRSFQDSNGDGIGDLRGIIDRLGYLSDLGVDAIWLSPIFPS
PMADFGYDVADYVGIDPIFGTMDDFDALVLTAHARGLKVILDLVPNHSSDQHPWFIESRS
SRDNRKRDWYIWRDPAPDGGPPTNWLSEFGGSGWEYDEATGQYYYHAFLKQQPDLNWRNP
EVRAAICEAMRFWLRKGVDGFRVDVIWHLIKDDQFRDNPPNPDFRPGMPPHAALIPQYSA
DRPETQQVVAELRSVIDEFDHRLLIGEIYLPIERLVAYYGADLNGAQLPFNFALLSTPWH
ARDIAALIDRYEQALPAGAWPNWVLGNHDRPRVASRVGPAQARVAAMLLLTLRGTPTMYY
GDELGMEQVEIAPEDVQDPFEKNVPGIGVGRDGCRTPMQWDASAHAGFSDVRPWLPLAPD
AIQDNAANLRADAQSILNLYRALLRLRRQLPQLSVGDYQPLAADGDLLLYRRHHRGQSVL
IALNLGSDPISAASDAIGLDGEVLLSTMLDRAGERIGATLDLRGHEGIIVGRAPEEVV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgttgcgagcgtgtcgtggtgggcggcgggtgtgctgtaccagatctatccg
cgctcgtttcaggacagcaatggcgacggcatcggcgatctgcgcggcatcatcgaccgg
ctgggctatctgtccgatctcggggtcgatgcgatctggctgtcgccgatctttccgtcc
cccatggcggatttcggctacgacgttgccgactatgtcggcatcgacccgatcttcggc
accatggacgatttcgacgcgctggtgctcaccgcgcatgcccgcggtctcaaggtcatt
ctcgacctggtgccgaaccattcgtccgaccagcatccctggttcatcgagagccggtcg
tcgcgcgacaatcggaagcgcgactggtacatctggcgcgatcctgcaccggacggcggg
ccgccgaccaactggctgtccgaattcggcggcagtggctgggagtacgacgaagccacc
ggccaatattactatcacgccttcctgaaacagcagcccgacctcaactggcgcaatccg
gaggtgcgagccgcgatctgcgaggcgatgcggttctggttgcgcaaaggcgtcgacggc
tttcgcgtagacgtgatctggcacctgatcaaggacgaccagttccgcgacaacccgccc
aatccggacttccgccccggcatgccgccgcacgcggcgctcatcccgcagtattccgct
gaccggccggagacgcagcaggtcgtcgccgaactgcgcagcgtgatcgacgaattcgat
caccgtctcctgatcggtgagatctatctgccgatcgagcggctggtggcttattatggg
gccgacctgaacggcgcacaattgccgttcaattttgcgctgttgtcgacgccctggcac
gcccgcgacattgccgccctgatcgatcgctacgagcaggcgttacccgccggtgcgtgg
ccgaactgggtgctcggcaaccacgatcgcccgcgggtggcgagccgggtcggaccggcg
caggcacgcgtcgccgcaatgctgctgctgacgctgcgcggcacaccgaccatgtattac
ggcgacgaactcggcatggagcaggtcgaaatcgcgccggaggacgtgcaggatccgttc
gagaagaacgtgccgggcatcggtgtcggccgcgacggctgccgtacgccgatgcagtgg
gacgcctccgcccatgctggcttctccgacgtccggccgtggctgccgctggcgcccgac
gcgatccaggacaacgccgccaatctgcgggccgatgcgcagtcgatcctgaacctatat
cgcgcgctgctgcggctgcggcggcagttgccgcagctctcggtcggcgactatcagccg
ctcgccgcggacggcgatctgctgctgtatcgccggcaccatcgggggcaatcggtgctg
atcgcgctcaatctcgggtccgatccgatctcggcggcgtccgacgcgatcggactcgac
ggcgaggtgctgctgtcgacgatgctggatcgcgccggcgaacgcatcggcgctacgctc
gatttgcgcggccacgagggcatcatcgtcggccgcgcgccggaagaggtcgtctag
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