Rhodopseudomonas palustris DX-1: Rpdx1_4992
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Entry
Rpdx1_4992 CDS
T01381
Name
(GenBank) TonB-dependent receptor plug
KO
K02014
iron complex outermembrane recepter protein
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpx02000
]
Rpdx1_4992
Transporters [BR:
rpx02000
]
Other transporters
Pores ion channels [TC:
1
]
Rpdx1_4992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ADU46532
UniProt:
E6VH30
LinkDB
All DBs
Position
5370457..5372568
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AA seq
703 aa
AA seq
DB search
MHSRPAAPRPCSALSRALLASTILVPSLSLITPATAQDVLPEIVVSATATRTSNAIVGTS
STVITAEDIARSPAQTVQDIIAQTPGVQSTSLYGGVNGTGSSVDLRGFGATATSNTLFLI
NGRRLNDLDLQGIDLSSLPLQSIERIEITRGGSGAVLYGDNAVGGVINIVTKTGAGGPPA
TFRAEGGVGSFNQRLAAVSAAFNSGPWSTSAFANHVRTDGYRANNALEQNNALGELRYTT
ADLSAFLNISGDDQHLGLPGSRTVDPSIGVNQLQTDRRGTNTPFDYADKQGANITAGFTK
SLWDGAELIVDGGVRDKRQQAGYFGSLPLLSSRASAFDAHLRTWSITPRLSIKNAFFGLP
SKILTGLDYYDATYDSDRGQYRGTPPVHVYNLSQKTLAGYWQQTIAVLPTTDFSYGGRVQ
SVKVEASDRLNPLAPGYFGEAQALPLNSIETQHALHVGLEHRFNDVFSVFARAARAFRTP
NVDERVASGPSYDAFFNPIPGTFALKTQTSVDVEGGFRIKSGPFEMQTSVYNMDLTNEIR
YDPVNFYNTNLDPTRRYGGETSSSLRISDSLLLRSGAAYTRATFREGPFSGNDVPLVSRY
TANASVTWNIWQKYVVFDATARVWSSRFMDSDNANSQVKIPANGTVDVKLSGEIDHFFWS
LSVINLFNAQYYDYAVASTFTPGRYGAYPLPGRTYLAKAGVTF
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcattcccgtcccgccgcgccgcggccctgctccgccctttcgcgcgcgcttctcgcc
tccacgattctggtgccttcactttcgctcatcacgcctgccaccgcgcaggacgtgctg
ccggagatcgtcgtcagcgccaccgcgacccgcacctccaacgccatcgtcggaacgtcg
agcacagtgatcaccgccgaagacatcgctcgttcaccggcccaaaccgtgcaggacatc
atcgcgcagacgcccggtgtgcagagcacgtcgctgtacggtggcgtcaacggcaccggc
tcctcggtcgatctgcgaggcttcggcgccaccgcaacctcaaacacgttgttcctgatc
aacggccgccgtctcaacgacctcgatctgcagggcatcgacttgtcgagcctcccgctg
caatcgatcgagcgtatcgagatcactcgcggcggcagcggtgcggtgctgtacggcgac
aatgctgtcggcggcgtcatcaacatcgtcaccaagaccggtgccggcggcccacccgca
acgttccgcgccgaaggcggcgtcggttcattcaaccaacgcctcgctgcggtgtcggcg
gctttcaattctggcccatggtcgacgtcggccttcgccaatcacgtccgtaccgacggt
taccgcgccaacaacgcgctggaacagaacaacgcgctcggcgaactgcgctacaccacc
gccgatctcagcgccttcctcaatatctccggcgacgaccagcatctcggcctgcccggc
tcccgcaccgtcgatccgtcgatcggcgtcaaccagctccagaccgaccgccgcggcacc
aacacgccgttcgactatgcggacaagcagggcgccaacatcaccgccggcttcaccaaa
tcactgtgggacggtgccgaactgatcgtcgacggcggcgttcgcgacaagcgtcagcag
gccggctatttcggcagcttgccgctgttgagttcccgcgccagcgcgttcgacgcacat
ctacggacctggtcgatcacgccgcggctgagcatcaagaacgcgttcttcggcctgccg
tcgaagatcctcaccggcctcgactattacgacgcgacctatgattccgaccgcggccag
tatcgcggcacgccgccggttcacgtctacaacctgtctcagaagaccctggccggctat
tggcagcagaccatcgccgtcctgccgaccaccgacttctcctatggcggccgggtgcag
agcgtgaaagtcgaggctagcgaccgactcaatccgctggcgcccggttatttcggcgaa
gcgcaggcgctgccgctgaacagcatcgagacccagcatgccctgcacgtcggcctcgag
catcgcttcaacgatgtgttcagcgtgttcgcccgcgccgctcgtgcgttccgcaccccg
aatgtcgacgaacgtgtcgcctccggaccgtcctacgacgcgttcttcaatccgatcccg
ggcaccttcgcgctcaagacccagacctcggtggatgtcgaaggcggcttccgcatcaag
tcaggtccgttcgagatgcagacgagcgtctacaacatggatctgaccaacgagatccgc
tacgatcccgtcaacttctacaacaccaatctcgatccgacccgccgttatggcggcgaa
accagttcttcgctccgcatcagcgactcgctgttgctgcgcagcggcgcggcctacacc
cgcgcgaccttccgcgaagggccgttctccggcaacgacgtgccgctggtgtcgcgctat
acggcaaatgccagcgtgacctggaacatctggcagaaatacgtcgtgttcgatgccact
gcgcgggtctggagcagtcgcttcatggacagcgacaatgccaacagccaggtcaagatc
ccggccaacggcaccgtcgacgtcaagctgagcggcgagatcgaccatttcttctggtcg
ctgagcgtgatcaacctgttcaacgcgcaatactacgactatgcggtggccagcaccttc
acgcccggccgctacggcgcctatccgctgcccggccggacctatctggccaaggcgggt
gtgactttctga
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