Rhodococcus pyridinivorans SB3094: Y013_01315
Help
Entry
Y013_01315 CDS
T02974
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpy03016
]
Y013_01315 (truB)
Enzymes [BR:
rpy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Y013_01315 (truB)
Transfer RNA biogenesis [BR:
rpy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Y013_01315 (truB)
Prokaryotic type
Y013_01315 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHD19432
UniProt:
V9XDN8
LinkDB
All DBs
Position
279325..280248
Genome browser
AA seq
307 aa
AA seq
DB search
MNDAAPPQEHPALARAGLLVVDKPAGMTSHDVVARCRRLLGTRKVGHAGTLDPMATGVLV
LGVERATKLLGLLALTTKSYTATIRLGQSTVTDDAEGETVATTDATHVTDEQIGEGVAAL
TGDIQQVPASVSAIKIDGKRAYARMREGEAVELKARPVTVSRFDVLARRDVPGSGFVDVD
VDVDCSSGTYIRALARDLGAALGVGGHLTALRRTKVGPFGLEHARTLEQLADDPTPSLDI
DAAVRTAFECRTISDEEVGLLANGRWLEPVGIHGVYGAVDAQGRAAALLQEKGKRAAAVF
VVRPSNM
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgccgcacccccgcaggaacatccggcactcgcccgcgcaggcctgctcgtc
gtcgacaagcccgccggcatgacgagccacgacgtggtggcgcgctgccgccgactgctc
ggcacccgcaaggtcgggcacgcgggcactctcgaccccatggcgacgggcgtgctcgtt
ctcggcgtcgagcgcgccaccaagctgctcgggctgctcgcactgacgaccaagtcgtac
accgcgacgatccgtctcgggcagagcaccgtcacggacgacgcggaaggcgagaccgtc
gcgaccaccgatgcgacgcacgtgaccgacgagcagatcggcgagggcgtggccgcgctg
acaggcgacatccagcaggtgcccgccagcgtcagcgccatcaagatcgacggcaagcgc
gcctacgcccgcatgcgcgagggggaggcggtcgagttgaaggcccggccggtcacggtc
tcgcggttcgacgtcctcgcccgccgcgatgtgcccgggagcggcttcgtggacgtcgac
gtcgacgtggactgctcgtccggcacctacattcgggcgctcgcacgcgatctcggcgcg
gccctcggagtgggcggtcatctcacggcgctgcgtcgcacgaaggtcggcccgttcggc
ctcgaacatgcccgcacgctcgaacagctcgccgacgacccgacgccgagcctcgacatc
gacgcggccgtgcgcacggccttcgagtgccgcaccatcagcgacgaggaggtggggctg
ctcgcgaacggccgctggctcgagcccgtcgggatccacggcgtctacggcgccgtggat
gcgcagggtcgggctgcagcgctgctgcaggagaagggcaagcgggctgcggcggtgttc
gtggtgcgcccctccaacatgtga
DBGET
integrated database retrieval system
