Rhodococcus pyridinivorans SB3094: Y013_01545
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Entry
Y013_01545 CDS
T02974
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpy03016
]
Y013_01545
Enzymes [BR:
rpy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Y013_01545
Transfer RNA biogenesis [BR:
rpy03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Y013_01545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
AHD19478
UniProt:
V9XAQ1
LinkDB
All DBs
Position
325120..326649
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AA seq
509 aa
AA seq
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MSLIDEEAPRTGARTYEVRTYGCQMNVHDSERLSGLLEDAGFTKAAPGASPDLVVFNTCA
VRENADNKLYGNLSHLRPVKDDNPDMQIAVGGCLAQKDRDTVVKKAPWVDVVFGTHNIGN
LPALLERARHNRRAEVEILDALEAFPSTLPAKRESSYAGWVSISVGCNNTCTFCIVPSLR
GKEVDRRPGDILAEVQALVDEGVLEVTLLGQNVNSYGRSFADPEQPRDRGAFASLLRACG
DIEGLERVRFTSPHPAEFTDDVIDAMAQTPNVCPQLHMPLQSGSDRILRAMRRSYRKERF
LGIIERVRAAMPHAAITTDIIVGFPGETEEDFQQTLEVVEKARFTSAFTFQYSKRPGTPA
ADMEGQVPKAVVQERYNRLIALQERITLEENRKLVGTEVELLVAAGEGRKNAETARMSGR
ARDGRLVHFRPEGAIDTAVRPGDVITIVVSDAAPHHLVADTPILTHRRTRAGDHFEQGRL
PKTPPIGVGLGLPSIGVPDPLPPQMGCNA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgtcactgatcgacgaagaagccccccgtaccggtgcccggacctacgaggtccgcacc
tacggctgtcagatgaacgtacacgactccgagcgtctgtcggggttgttggaggacgcc
ggcttcaccaaggccgcgcccggtgcgtcaccagatctggtggtcttcaacacctgcgcg
gtgcgggagaacgccgacaacaagctgtacggcaatctgagtcatctgcgtccggtcaag
gacgacaaccccgacatgcagatcgccgtcggaggctgcctcgcccagaaggaccgcgac
acggtcgtgaagaaagcgccctgggtcgacgtggtcttcggcacgcacaacatcggcaat
ctccccgcactgctcgaacgcgcgcggcacaatcgccgtgccgaggtcgagatcctcgac
gccctcgaggcgttcccctcgacgctgcccgccaagcgcgagtcgtcgtacgccggatgg
gtgtcgatctccgtcggctgcaacaacacgtgcaccttctgcatcgtgccgtcgctgcgc
ggcaaggaggtcgaccggcgcccgggtgacatcctcgccgaggtgcaggcgctcgtcgac
gagggcgtgctcgaggtgacactgctcggccagaacgtcaactcctacggccggtccttc
gccgatccggagcagccccgcgaccggggcgccttcgcgtcgctgctgcgcgcgtgcggc
gacatcgagggcctcgagcgggtgcgcttcacgtccccgcatccggcggaattcaccgac
gacgtcatcgacgcgatggcgcagacccccaacgtgtgcccgcaactgcacatgccgctg
cagtccggcagcgaccggatcctgcgcgccatgcgccgctcgtaccgcaaggaacgcttc
cttggcatcatcgagcgggttcgggccgcgatgccgcacgccgcgatcaccaccgacatc
atcgtcggtttccccggtgagaccgaggaggacttccagcagaccctcgaggtcgtcgag
aaggcgcgtttcaccagcgcgttcaccttccagtactcgaagcgtcccggcacgcccgca
gcagacatggagggtcaggtccccaaggccgtagtgcaggagcgctacaaccgtctgatc
gcgctgcaggaacgcatcaccctcgaggagaaccgcaagctcgtcggcacggaggtcgaa
ctgctcgtcgcggcgggggagggtcgcaagaacgccgagaccgcccggatgagcgggcgt
gcccgcgacggccgcctcgtccacttccgtcccgagggcgcgatcgacaccgcggtgcgt
cccggcgacgtcatcacgatcgtcgtcagcgacgccgcgccgcaccacctcgtcgcggac
accccgatcctcacgcaccgccgtacacgtgcgggcgaccacttcgaacagggccggttg
cccaagacaccgccgatcggtgtcggactcggactgccgagcatcggcgtccccgacccg
ctgccgcctcagatgggatgcaacgcatga
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