Rhodococcus pyridinivorans SB3094: Y013_01570
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Entry
Y013_01570 CDS
T02974
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00300
Lysine biosynthesis
rpy00470
D-Amino acid metabolism
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
rpy01120
Microbial metabolism in diverse environments
rpy01230
Biosynthesis of amino acids
Module
rpy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Y013_01570
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Y013_01570
Enzymes [BR:
rpy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Y013_01570
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AHD19483
UniProt:
V9XAQ6
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Position
330552..331418
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AA seq
288 aa
AA seq
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MEFSKGHGTENDFVILPDPDARLDLDAGRIAALCDRRRGLGADGVLRVARAGALVSAGAL
GELPEGTDADDWFMDYRNGDGSIAEMCGNGVRVFAHYLTAHGFEDRREFVVGSRAGGKPV
TVHETGPVLGEVTVDMGTVRTLGESAATIDGRVYPGIGIDVGNPHLACVDPHLNDTSLAG
LDLTSPGFDPGFFPHGVNIEFLTPIAAGTVHMRVHERGVGETRSCGTGTVAAAAAALRFD
GASDGAVQVRIPGGSVEVRIENGRAWLRGPSVLVATGDLDDTWWSAPI
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagcaaagggcacggaaccgagaacgacttcgtgatccttccggatcccgac
gcccgcctggacctcgacgcaggccggatcgcggccctgtgcgaccggcgtcgcgggctc
ggcgccgacggtgtgctccgcgtggcccgggccggggcactggtgtcggccggcgcgctc
ggagaactgcccgagggcaccgacgccgacgactggttcatggactaccgcaacggcgac
ggatccatcgccgagatgtgcggcaacggtgtgcgggtgttcgcgcactatctgaccgcg
cacgggttcgaggaccgccgcgagttcgtcgtcggcagccgggcgggaggcaagcccgtc
accgtgcacgagacaggaccggtcctcggcgaggtgaccgtggacatggggacggtgcgc
accctcggcgagtcggcggcgaccatcgacgggcgggtctatccgggcatcggcatcgac
gtcggcaacccgcacctcgcgtgcgtggacccgcacctgaacgacacgagccttgccggt
ctcgacctcacctcgcccggcttcgacccgggcttcttcccgcacggggtcaacatcgag
ttcctgaccccgatcgcggccgggacggtccacatgcgcgtccacgaacgcggcgtgggg
gagacccgctcgtgcggaaccggcacggtggccgcggctgctgcagccctgcgcttcgac
ggcgcatccgacggcgcggtgcaggtgcggatccccggtggctcggtcgaggtgcgcatc
gagaacggtcgcgcctggttgcgcgggccgtctgtgctggtcgcgacgggtgacctcgac
gacacctggtggtcggcgccgatctga
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