Rhodococcus pyridinivorans SB3094: Y013_01920
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Entry
Y013_01920 CDS
T02974
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00730
Thiamine metabolism
rpy00900
Terpenoid backbone biosynthesis
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
Module
rpy_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Y013_01920
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Y013_01920
Enzymes [BR:
rpy01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
Y013_01920
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Gene cluster
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Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
TPP_enzyme_C
PFOR_II
E1_dh
Motif
Other DBs
NCBI-ProteinID:
AHD19545
UniProt:
V9XC24
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Position
401326..403269
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AA seq
647 aa
AA seq
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MGVLSRIQSPDDLRRLSPVELTELAGEIREFLVEKVAATGGHLGPNLGVVELTIALHRVF
DSPRDPILFDTGHQAYVHKILTGRRDEFDGLRQKGGLSGYPCRAESEHDWIESSHASAAL
SYADGLAKAYSLSGQSDRTVVAVVGDGALTGGMCWEALNNIAAGQNRSMVIVVNDNGRSY
APTIGGLAEHLAALRLKPGYEKVLDNSRRIVKRIPWIGSAAYSVLHGMKAGVKDAVSPQV
LFTDLGIKYLGPVDGHDEQAMESALRRAKAYGGPVLVHAVTRKGAGYAPAENHLADQMHA
TGVMDPRTGRAKSASAPDWTSVFSDELIALGEKREDVVAITAAMPGPTGLAKFGERFPER
TFDVGIAEQHAVTSAAGLALGGMHPVVAVYSTFLNRAFDQLLMDVALLRQPVTVVLDRAG
VTGSDGASHNGMWDLSLLGIVPGIRVAAPRDGATLREELGEALDVSDGPTVLRFPKGSVG
EDIPAIERLDGTVDVLRMPPSRCGDALIVAVGAFAGLALDVADRLSRQGIDAAVVDPRWV
FPVPDAVVDLARGFRIVVTIEDSGLHGGVGSAVSAALRRNGVDVPARDLGVPQKFLDHAS
RNEIHAELGLTAQDVARQVTGWVAGLDREPEERSRPSAVEQSDREAG
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgttctgtcccgcatccagtcgcccgacgatctacgtcgactctctcctgtggag
ctcaccgagctcgcgggggagatccgggaattcctggtcgagaaggtcgcggcgaccggc
ggtcacctcggtcccaatctcggcgtcgtcgagctgaccatcgctctgcaccgggtgttc
gattcgccacgcgatccgatcctcttcgacaccggtcaccaggcctacgtccacaagatc
ctcaccggtcgtcgcgacgagttcgacggtctccggcagaaaggcgggttgtccggctac
ccgtgccgcgcggagagcgaacacgactggatcgagtcgtcgcacgcctcggcggccctg
tcgtacgccgacggactcgccaaggcctattcgctgtccggacagtccgatcggaccgtg
gtggccgtggtgggcgacggcgcgctgaccggcggtatgtgctgggaggcgctcaacaac
atcgccgccgggcagaaccgttcgatggtgatcgtcgtcaacgacaacggccgctcctac
gcgcccacgatcggcggtctcgccgagcacctcgcggcgctgcgcctcaagcccggctac
gagaaggtgctcgacaacagtcggcgcatcgtcaagcggatcccctggatcggctcggcg
gcctactcggtgctgcacggcatgaaggccggtgtgaaggacgcggtcagcccgcaggtg
ctcttcaccgatctgggcatcaagtatctcggcccggtcgacgggcacgacgagcaggcg
atggaatcggcgctgcgtcgcgcgaaggcgtacggcggtccggtcctcgtccacgccgtc
acccgcaagggagcgggctacgcgcccgccgagaaccacctcgccgatcagatgcacgcc
accggcgtgatggatccgcgcacgggtcgggcgaagtccgcctccgctcccgactggacg
tcggtcttctccgacgaactcatcgcgctgggggagaagcgggaggacgtcgtggcgatc
accgccgcgatgcccggaccgaccggcctcgccaagttcggcgaacggttccccgagcgc
accttcgacgtcggcattgccgaacagcacgcggtgacgtcggcggcgggtctcgcgctc
ggcggaatgcatcccgtcgtcgccgtctactcgaccttcctcaaccgcgccttcgaccag
ctgctcatggacgtcgcactgcttcggcagccggtcaccgtggtgctcgaccgggcgggc
gtcacgggttcggacggggccagtcacaacggcatgtgggatctgtccctcctgggaatc
gttcccggcatccgggtcgccgctccgcgcgacggggcgacgctgcgagaggaactcggt
gaggcgctcgacgtctccgacggcccgaccgtcctccggttccccaaaggctcggtggga
gaagacatcccggcgatcgagcgtctcgacggcacggtcgacgtgctgcggatgccgccg
tcgcggtgcggcgacgcactgatcgtcgcggtcggcgccttcgccggtctcgcgctcgac
gtcgccgatcgtctttccaggcagggcatcgacgccgcggtcgtcgacccgcgatgggtg
ttccccgtgcccgacgcggtggtcgacctcgcacgcggcttccggatcgtcgtcacaatc
gaggacagcggcctccacggtggtgtcggctcggcggtctccgccgcgttgcgccgcaac
ggcgtcgacgtgcccgcccgcgatctcggggtgccgcagaagttcctcgatcacgcctcc
cgcaacgagatccacgccgaactcggtctgactgcccaggacgtggcgcgtcaggtcacc
ggctgggtcgccggcctcgacagagaacccgaggagcgatcgcgaccgtcggcggtcgag
cagtccgaccgcgaagcgggctga
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