Rhodococcus pyridinivorans SB3094: Y013_02700
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Entry
Y013_02700 CDS
T02974
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Y013_02700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpy03400
]
Y013_02700
DNA repair and recombination proteins [BR:
rpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Y013_02700
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AHD19688
UniProt:
V9XBA2
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All DBs
Position
complement(560132..561184)
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AA seq
350 aa
AA seq
DB search
MRSIWKGSLAFGLVNVPVKVYSATESHDISFHQVHAKDGGRIKYQRVCTECGEVVPYQEI
DKAYDSEDGERVVLTDEDFEKLPAAEKHEIPVLQFVPTEQIDPILFEKSYYLEPDSSSPK
AYGLLAATLEQSDRTALVHFTLRQRTRLAALRTRDGLLILQTLLWPDEVRAAEFESLDDI
EKPKQRELAMAETLVESMSDDFDPTEFTDEYQVELRTLIDEALARGGEKVFQVAEHDTGE
EDAEVLDLVAALQRSVDAAGKKVPSGSSSGGKKSSKDDDEDEGTKKKAPAKKTASKSSAS
KSSASKSSAAKKTPAKKSTAKKTASKSSAVKKTPAKKTAAKKTSGERKGA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgatctggaaaggctcactcgcgttcggcctcgtcaacgtgccggtgaaggtg
tactcggcaaccgagtcacacgacatctccttccaccaggtgcacgcgaaggacggcggg
cggatcaagtatcagcgtgtgtgtaccgagtgcggtgaggtcgtcccctaccaggagatc
gacaaggcgtacgactccgaggacggcgagcgggtcgtgctcaccgacgaggacttcgag
aaactcccggccgccgagaaacacgagatcccggtgctgcagttcgtgcccaccgagcag
atcgacccgatcctgttcgagaagtcctactatctcgaacccgattcgtcgtcgccgaag
gcctacggcctgctcgccgccactctcgaacagagcgaccggacggcgctggtgcacttc
acccttcgccagcgcacccggctggccgccctgcgcacccgcgacggactgctcatcctg
cagaccctgctgtggccagacgaggtccgagcggccgagttcgagtcgctcgacgacatc
gagaagccgaaacaacgcgaactcgcgatggccgagaccctggtcgagtcgatgtccgac
gatttcgatcccaccgaattcaccgacgagtaccaggtggaactgcgcacgctgatcgac
gaggccctcgcccgcggcggcgagaaggtcttccaggtcgccgaacacgacaccggtgaa
gaggacgccgaggtgctggacctcgtggcggccctgcagcgcagcgtcgatgcggcgggc
aagaaggtcccgtccggttcgtcctccggcgggaagaagtcctcgaaggacgacgatgag
gacgaaggcacgaagaagaaggcccccgcgaagaagaccgcgtcgaagagttcggcgtcg
aagagttcggcgtcgaagagttcggcggccaagaagactcctgcgaagaagagcacggcg
aagaagaccgcgtccaagagctcggcagtcaagaagactcctgcgaagaagacggccgcc
aagaaaacctccggcgaacgcaaaggcgcctga
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