Rhodococcus pyridinivorans SB3094: Y013_02720
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Entry
Y013_02720 CDS
T02974
Name
(GenBank) aconitate hydratase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00020
Citrate cycle (TCA cycle)
rpy00630
Glyoxylate and dicarboxylate metabolism
rpy00640
Propanoate metabolism
rpy00720
Other carbon fixation pathways
rpy01100
Metabolic pathways
rpy01120
Microbial metabolism in diverse environments
rpy01200
Carbon metabolism
rpy01210
2-Oxocarboxylic acid metabolism
rpy01230
Biosynthesis of amino acids
Module
rpy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpy_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Y013_02720
00630 Glyoxylate and dicarboxylate metabolism
Y013_02720
00640 Propanoate metabolism
Y013_02720
09102 Energy metabolism
00720 Other carbon fixation pathways
Y013_02720
Enzymes [BR:
rpy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
Y013_02720
4.2.1.99 2-methylisocitrate dehydratase
Y013_02720
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
AHD19692
UniProt:
V9XED1
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Position
complement(565258..568062)
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AA seq
934 aa
AA seq
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MSTSSDSFGAKGSLQVGDNSYEIFRLSAVPGTEKLPYSLKVLAENLLRTEDGANITADHI
RAIANWDPSADPSIEIQFTPARVIMQDFTGVPCVVDLATMREAVTTLGGDPNKVNPLSPA
DMVIDHSVILDYFGRADALERNVDLEYERNGERYQFLRWGQGAFDDFRVVPPGMGIVHQV
NIEYLAPTVMVRNGQAYPDTCVGTDSHTTMVNGLGVLGWGVGGIEAEAAMLGQPVSMLIP
RVVGFKLTGEIQPGVTATDVVLTVTDMLRKHGVVGKFVEFYGAGVAEVPLANRATLGNMS
PEFGSTAAIFPIDGETINYLRLTGRSDEQLALVEAYAKEQGLWHDPSREPEFSEYLELDL
STVVPSIAGPKRPQDRILLSESKVAFRKDIHNYVEENLPAEHTKLDEAVEETFPASDPAV
LSFADDGAVDVHSAANGAHGRPSKPVKVVSEERGEFVLDHGAVVVAGITSCTNTSNPSVM
LGAALLARNAVEKGLSTKPWVKTNMAPGSQVVNDYYEKAGLWPYLEKLGFYLGGFGCTTC
IGNTGPLPEEISKAVNDNDLSVTAVLSGNRNFEGRISPDVKMNYLASPPLVIAYALAGTM
DFDFETDALGKDKDGNDVFLKDIWPSAQEIDDTIKSAINQDMFRKSYADVFKGDERWQNL
ETPEGDTFAWDEDSTYVRKAPYFEGMTMEPDAVSDIKGARVLALLGDSVTTDHISPAGPI
KPGTPAAQYLDAHGVERKDYNSLGSRRGNHEVMVRGTFANIRLQNQLLDGVSGGYTRDFT
QDGAPQAFIYDASQNYQKAGIPLVVLGGKEYGSGSSRDWAAKGTRLLGVKAVITESFERI
HRSNLIGMGVIPLQFPAGESAASLGLTGTEVFDIEGIEKLNEGVTPKTVKVTATKDNGEK
VTFDAVVRIDTPGEADYYRNGGILQYVLRNMIRG
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccagtagtgattcgttcggcgccaagggttcgctgcaggtcggagacaactcc
tacgagatcttccgcctgtcggccgtccccggcaccgagaaacttccttactctttgaag
gtcctggccgagaacctgctgcgcaccgaggacggtgccaacatcacggccgatcacatc
cgggccatcgccaactgggatccctccgccgacccgagcatcgagatccagttcacgccc
gcgcgcgtgatcatgcaggacttcacgggtgtcccctgtgtcgtcgacctcgccaccatg
cgtgaggccgtgaccaccctgggcggcgacccgaacaaggtcaaccccctctcccccgcc
gacatggtcatcgaccactcggtgatcctcgactacttcggtcgcgccgacgccctcgag
cgcaacgtcgacctcgagtacgagcgcaacggcgagcgttaccagttcctgcgctggggc
cagggtgccttcgacgacttccgcgtcgttcccccgggcatgggcatcgtccaccaggtc
aacatcgagtacctggccccgaccgtcatggtccgcaacgggcaggcctaccccgacacc
tgcgtcggcaccgactcgcacacgacgatggtcaacggcctcggcgtgctcggctggggc
gtcggcggcatcgaggccgaggccgcgatgctcggccagccggtctccatgctcatcccg
cgcgtggtcggcttcaagctcaccggtgagatccagcccggcgtgaccgcgaccgacgtc
gtgctcaccgtcaccgacatgctgcgcaagcacggcgtcgtcggcaagttcgtcgagttc
tacggcgccggcgtggccgaggtccccctcgccaaccgcgcgaccctcggcaacatgagc
cccgagttcggttcgaccgcagcgatcttcccgatcgacggcgagaccatcaactacctg
cgcctgaccggccgcagcgacgagcagctcgctctcgtcgaggcgtacgccaaggagcag
ggcctgtggcacgatccgagccgcgagcccgagttctccgagtacctcgagctcgacctg
tcgacggtcgtcccgtcgatcgccggcccgaagcgcccgcaggaccgcatcctgctgtcc
gagtcgaaggtcgccttccgcaaggacatccacaactacgtggaggagaacctcccggcc
gagcacaccaagctcgacgaggccgtcgaggagaccttcccggcgtccgacccggccgtg
ctgtccttcgcggacgacggtgccgtcgacgtccactcggccgccaacggcgcccacgga
cgtccgtcgaagccggtcaaggtcgtctccgaggagcgcggcgagttcgtcctcgaccac
ggcgccgtcgtggtcgcgggcatcacctcctgcaccaacacctccaacccgtcggtcatg
ctcggcgccgcgctgctcgcccgcaacgccgtcgagaagggcctgtccaccaagccgtgg
gtcaagaccaacatggctccgggttcgcaggtcgtcaacgactactacgagaaggccggc
ctgtggccgtacctcgagaagctcggcttctacctcggtggcttcggttgcaccacctgc
atcggtaacaccggcccgctgcccgaggagatctcgaaggccgtcaacgacaacgacctc
tcggtcaccgcggtgctctccggcaaccgcaacttcgagggtcgtatctcccccgacgtg
aagatgaactacctggcctcgccgccgctggtcatcgcgtacgcgctcgcgggcacgatg
gacttcgacttcgagaccgacgcgctgggcaaggacaaggacggcaacgacgtcttcctg
aaggacatctggccttccgcccaggagatcgacgacaccatcaagtcggcgatcaaccag
gacatgttccgcaagtcctatgccgacgtcttcaagggcgacgagcgctggcagaacctc
gagacccccgagggcgacaccttcgcgtgggacgaggactcgacgtacgtccgcaaggct
ccgtacttcgagggcatgacgatggagccggacgcggtcagcgacatcaagggcgctcgc
gtcctcgcgctgctcggcgattcggtcaccaccgaccacatcagcccggccggtccgatc
aagccgggtaccccggccgcgcagtacctcgacgcccacggtgtcgagcgcaaggactac
aactcgctcggttcgcgtcgtggcaaccacgaggtcatggtccgcggcaccttcgcgaac
atccgtctgcagaaccagctgctcgacggggtctccggtggttacacccgcgacttcacc
caggacggtgctccgcaggcgttcatctacgacgcctcgcagaactaccagaaggccggc
atcccgctggtcgtcctcggtggcaaggagtacggttccggctcctcgcgtgactgggcc
gccaagggcacccgcctgctcggcgtcaaggccgtcatcaccgagtccttcgagcgcatc
caccgctcgaacctcatcggcatgggcgtcatcccgctgcagttcccggcgggcgagtcg
gccgcgtcgctgggcctgaccggcaccgaggtcttcgacatcgagggcatcgagaagctc
aacgagggcgtcacgccgaagaccgtcaaggtcacggcgaccaaggacaacggcgagaag
gtcaccttcgacgctgtcgtccgcatcgacacccccggtgaggcggactactaccgcaac
ggcggcatcctgcagtacgtgctgcggaacatgatccgcggctga
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