Rhodococcus pyridinivorans SB3094: Y013_02730
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Entry
Y013_02730 CDS
T02974
Name
(GenBank) invasin
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpy01002
]
Y013_02730
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpy01011
]
Y013_02730
Peptidases and inhibitors [BR:
rpy01002
]
Cysteine peptidases
Family C40
Y013_02730
Peptidoglycan biosynthesis and degradation proteins [BR:
rpy01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
Y013_02730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
Motif
Other DBs
NCBI-ProteinID:
AHD19694
UniProt:
V9XCD5
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All DBs
Position
569319..571223
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AA seq
634 aa
AA seq
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MRRFGIHGGIPRRSGPDGTATTLTAGRRPDSPTAGRTPRTRTGTLLAGLGLVTAVLLTVT
TTASAAPPPPPNPSDAEIDRAGAAVAANIDRVGQLIVRIADADQQLAELDAQVAIRREDV
NRALVDLQSARDAADLAERVVVDSRRALDDAADRIAAAQKNFDAFVRDSYTRGANSVSLA
AFLDVDGPDDLLDRAQVMRLLSAGRTAVLDALQRARAQEANSHSRARAAKLEADAAAEAA
EQRRAEAEAAIAVARAELGRQAAEKSRIEQERANAQSELDRARVNVAGLEGQRAQYQDYW
ERRRAAEEAAAAAAAEAARVAAAEAAERVAADAAARERAAELANGRRPHTLIEESPSTGE
SDVASPGEVTTESGAPEGSDTDTSGTDTSGTDTSGTDTAAPDYTDDATVPDGTDGGTVPD
GTDDGSVPDGTDSGTIPDEDEDEDSGDDGGIDWENPDPGDPVVETPGSGTGGSGSRPSTP
NSTPGTPSRPSVTGPVAVEIVIDRAMSQIGVPYAWGGGNENGPTRGIRDGGVADVHGDYA
KVGFDCSGLMIYAFAGIGISLPHYTGYQYTAGTQVPSSQMRRGDMIFYGPNASQHVALYL
GDGQMLEAPQSGSFVKISPVRWGGMTPYVVRMVS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtgagacggttcggtatccacggagggattccgcgacggtcggggccggacggcaccgct
acgacgctcactgcaggccgtcgacccgacagtccgacggccggtcgcaccccgcggacg
cgcacaggcacgctcctcgccggtttggggttggtcacagccgtgctcctcaccgtgacc
acgacggcgtccgccgcaccgcccccgccgccgaacccctcggacgccgagatcgaccgg
gcaggtgcggccgtcgcggccaacatcgaccgggtcgggcagctgatcgtccggatcgcc
gacgcggatcagcagctcgccgagctcgacgcgcaggtcgccatccgccgcgaggacgtc
aaccgcgccctcgtcgatctccagagcgcgcgcgacgcggcggatctcgccgaacgggtg
gtcgtggattcccgccgcgcactcgacgacgccgccgaccggatcgccgctgcccagaag
aacttcgacgcgttcgtccgcgacagctacacccgtggcgccaactcggtctccctcgcg
gccttcctcgacgtcgacggtcccgacgatctgctcgaccgcgcccaggtcatgcggttg
ctgtccgccgggcgcaccgcggtgctcgatgcgctccagcgcgcccgggcccaggaggcc
aactcccactcgcgggcacgcgcggccaagctcgaggccgacgcggcggcggaagccgcc
gagcagcgcagggccgaggccgaggccgcgatcgccgtcgcgcgagcggaactcggtcgg
caggctgccgagaagtcgcgcatcgagcaggaacgtgcgaacgcgcagagcgaactcgac
cgggcccgcgtgaacgttgcgggcctggaagggcaacgcgcgcagtaccaggactactgg
gagcgtcgccgcgcagccgaggaagcagctgccgcggcggccgccgaggcggcacgggtc
gcggcagccgaggcagccgagcgtgtcgccgccgacgccgcagcccgggaacgtgcggcg
gaactcgccaacggccgtcgcccccacacgctgatcgaggagtctccgtcgaccggcgag
agcgacgtcgcctcaccgggtgaggtcaccaccgaatccggagcgccggagggcagtgat
accgatacgagtggcaccgatacgagtggcaccgatacgagtggcaccgacacggctgca
ccggactacaccgacgacgccacggtcccggacggtaccgacggtggaaccgtcccagac
ggtaccgacgatggatccgtcccggatggcaccgacagcggcacgatccccgacgaggac
gaagacgaggacagcggcgacgacggtgggatcgactgggagaacccggatccgggcgac
cccgtcgtggagactcccggatcggggaccgggggatcgggttcccgcccctccacaccg
aattcgacgcccgggaccccgtcgcgtccgtccgtcaccggtcccgttgcggtggagatc
gtcatcgaccgtgcgatgtcccagatcggcgtcccgtacgcgtggggtggtggcaacgag
aacggcccgacccgcggtattcgcgacggcggcgtcgccgatgtccacggcgactacgcc
aaggtcggcttcgactgctccggactgatgatctacgcgttcgcgggcatcggcatctcg
ctcccgcactacaccggctaccagtacacggccggtacccaggttccgtcgtcgcagatg
agacggggcgacatgatcttctacgggcccaacgccagccagcacgtcgcgctgtatctc
ggcgacgggcagatgctcgaggcgccgcagtcgggatcgttcgtgaagatctcgccggta
cgctggggcggcatgacaccgtacgtggtgcgcatggtgtcgtga
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