Rhodococcus pyridinivorans SB3094: Y013_03200
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Entry
Y013_03200 CDS
T02974
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00020
Citrate cycle (TCA cycle)
rpy00480
Glutathione metabolism
rpy00720
Other carbon fixation pathways
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
rpy01120
Microbial metabolism in diverse environments
rpy01200
Carbon metabolism
rpy01210
2-Oxocarboxylic acid metabolism
rpy01230
Biosynthesis of amino acids
rpy04146
Peroxisome
Module
rpy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpy_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Y013_03200
09102 Energy metabolism
00720 Other carbon fixation pathways
Y013_03200
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Y013_03200
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Y013_03200
Enzymes [BR:
rpy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Y013_03200
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Gene cluster
GFIT
Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
AHD19771
UniProt:
V9X8M6
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Position
672124..674382
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AA seq
752 aa
AA seq
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MSADKQSTIIYTLTDEAPLLATYAFLPIVRTFAGAAGIEVETSDISVPARILAEFPEHLT
EEQRVPDNLAELGRLTQLPETNIIKLPNISASVPQLLAAIKELQSKGYQVPDFPDAPKTD
EERAIRERYGKILGSAVNPVLREGNSDRRAPRAVKEYARKHPHSMGEWSMASRSHVAHMR
HGDFYHGEKSMTLDRARKVRMELVTKDGETIVLKPEVELGEGDIMDSMFMSKKALLEFYE
EQMEDARKTGVMFSLHVKATMMKVSHPIVFGHAVKTFYKDAFAKHQKLFDELGVNVNNGL
GDLYDKIETLPSTQRDEIKQDLHNCHEHRPELAMVDSARGISNFHSPSDVIVDASMPAMI
RSGGKMYGADGRPKDVKAVMPESTFARIYQEIINFCKTNGAFDPTTMGTVPNVGLMAQKA
EEYGSHDKTFEVPEAGEANFVDAETGEVLLTQHVEAGDIWRMCTVKDAPIRDWVKLAVTR
ARNSGMPVLFWLDPYRPHENELIKKVELYLQDHDTDGLDIHIMSQVRSMRYTLERLNRGM
DTIAATGNILRDYLTDLFPILELGTSAKMLSIVPLMAGGGLYETGAGGSAPKHVKQLVEE
NHLRWDSLGEFLALAVSLEDLGIKTGNERAKIVANALDAATGKLLETNKSPSRKVGELDN
RGSQFYLAMYWAQELAAQTEDPELAEQFAPLAEALARDEDTIVRELNEVQGAPVDIGGYY
RPDRDKTVAVMRPSRTLITALTAVDPEAGNAP
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgacaagcagtcgaccattatctatacgttgaccgacgaggcgccgttgctt
gcgacctacgccttcctgccgatcgtgcgtaccttcgctggagccgcgggcatcgaggtc
gagaccagcgacatctcggtgccggcgcggatcctggccgagttccccgagcacctcacg
gaagagcagcgcgtcccggacaacctggccgagctgggtcgtctgacgcaactgcccgag
accaacatcatcaagctgcccaacatcagtgcgtccgtgccgcagctcctggctgccatc
aaggaactgcagagtaagggctaccaggtcccggatttcccggacgccccgaagacggac
gaagagcgtgccatccgggagcgctacggcaagattctcggcagtgcggtcaaccctgtc
ctgcgtgaaggcaactccgatcggcgcgcaccccgggcggtgaaggagtacgcccgtaaa
cacccgcacagcatgggcgagtggtcgatggcctcacgcagccacgtcgcgcacatgcgg
cacggcgacttctaccacggcgagaagtcgatgacgctggaccgggcgcgcaaggtccgg
atggagctggtcaccaaggatggcgagacgatcgtcctcaagcccgaagtggagctgggt
gagggcgacatcatggacagcatgttcatgagcaagaaggcgttgctcgagttctacgag
gagcagatggaggatgcgcgcaagacgggcgtgatgttctcccttcacgtcaaggcgacg
atgatgaaggtctcgcaccccattgtcttcggccacgcggtgaagaccttctacaaggac
gccttcgccaagcatcagaagctgttcgacgaattgggcgtcaacgtcaacaacggtctc
ggcgacctgtacgacaagatcgagacgctgcccagtacgcagcgcgacgaaatcaagcag
gacctgcacaactgccatgagcaccgtcccgaattggccatggtcgattccgcacgcggc
atctccaacttccattcccccagcgatgtcatcgtggatgcctcgatgcccgcaatgatt
cgctcgggcggcaagatgtacggcgccgacggacgacccaaggacgtcaaggcggtcatg
ccggagtccactttcgcgcgcatctaccaggagatcatcaacttctgtaagaccaacggc
gcgttcgacccgacgaccatgggtaccgttcccaacgtcggtctcatggcgcagaaggcc
gaggagtacggctcgcacgacaagaccttcgaagttccggaggcgggcgaggccaacttc
gtcgatgccgagaccggtgaggtgctgctcacccagcacgtcgaggcgggtgacatctgg
cgcatgtgcaccgtcaaggacgcgccgatccgcgactgggtcaagctcgcggtcacccgg
gcacgcaactccggtatgccggtcctgttctggctcgacccgtaccgcccccacgagaac
gagttgatcaagaaggtcgagctgtacctgcaggatcatgacaccgatggcctcgacatc
cacatcatgtcgcaggtgcgctcgatgcggtacacgctggagcggctgaaccgcggaatg
gacaccatcgccgcgaccggcaacatcctgcgtgactacctcaccgacctgttccccatc
ctcgagctcggtacgagcgccaagatgctgtcgatcgtgccgctgatggcgggtggcggc
ctctacgagacgggcgccggcgggtcggcgcccaagcacgtcaagcagttggtggaggag
aaccacctgcgctgggattcgctcggtgagttcctggcgttggccgtaagcctggaggac
ctcggcatcaagaccggcaacgagcgcgccaagatcgtggcgaacgcgctcgatgcagcg
accggcaagctgctggagacgaacaagagcccgtcgcgcaaggtcggcgagctcgacaac
cggggcagccagttctacctcgcgatgtactgggcacaggagcttgccgcgcagaccgag
gatccggaactcgcagaacagttcgccccgctggccgaggcactggccagggacgaggac
acgatcgtgcgagagttgaacgaggtgcagggcgcgccggtcgacatcggcggctactac
cggccggacagggacaagaccgtggccgtgatgcggccgagtcggaccttgatcaccgcg
ctgacggcagtcgaccctgaggccggaaacgcaccgtga
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