Rhodococcus pyridinivorans SB3094: Y013_05560
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Entry
Y013_05560 CDS
T02974
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00020
Citrate cycle (TCA cycle)
rpy00190
Oxidative phosphorylation
rpy00650
Butanoate metabolism
rpy00720
Other carbon fixation pathways
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
rpy01120
Microbial metabolism in diverse environments
rpy01200
Carbon metabolism
Module
rpy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpy_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Y013_05560 (sdhA)
00650 Butanoate metabolism
Y013_05560 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
Y013_05560 (sdhA)
00720 Other carbon fixation pathways
Y013_05560 (sdhA)
Enzymes [BR:
rpy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Y013_05560 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
Thi4
FAD_oxidored
GIDA
AlaDh_PNT_C
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AHD20168
UniProt:
V9XCQ7
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All DBs
Position
complement(1163612..1165528)
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AA seq
638 aa
AA seq
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MVDVERHKVDVVVIGAGGAGLRAVIEARQRGFSVAVVCKSLFGKAHTVMAEGGCAAAMGN
ANPRDSWQVHFQDTMRGGKFLNNWRMAELHAREAPDRVWELETYGALFDRTPDGRISQRN
FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDHAEHGDYEARVRVFAECTITELLKD
DEGRIAGAFGYWRETGRFVLFEAPAVVIATGGIGKSWKVTSNSWEYTGDGHALALRAGAT
LINMEFVQFHPTGMIWPPSVKGILVTEGVRGDGGVLKNSEGERFMFSYIPPVFKGQYAET
EEEADRWYEDQENNRRTPDLLPRDEVARAINSEVKDGRGTPHGGVFLDIASRMPADEIMR
RLPSMHHQFKELADVDITAEAMEVGPTCHYVMGGIEVDPDTAAAAVPGLFAAGECSGGMH
GSNRLGGNSLSDLLVFGRRAGLGAADYVQSLTSRPIVGDADIDAAARAALSPFDPADTDR
AENPYTLHTDLQQVMQDLVGIIRRADEIERALRELDTLRTRIRNVAVEGHRQFNPGWHLA
LDLRNMLLVCECVARAALQRTESRGGHTRDDHPSMDPEWRRTLLACRLDGGDPFVPDVTV
TTERQQPMRPDLLELFDIDELGKYYTDEELADHPGRRG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgtcgaacggcacaaggtcgacgtcgtcgtgatcggagcaggcggcgccggg
ctacgcgcggtgatcgaggcgcggcaacgcggcttctccgtcgccgtggtgtgcaagtcg
ctgttcggcaaggcccacaccgtgatggccgagggcggatgtgccgccgcgatgggcaat
gccaacccccgcgactcctggcaggtgcacttccaggacacgatgcgcggcggcaagttc
ctcaacaactggcggatggccgaactgcacgcccgtgaggcccccgaccgcgtgtgggag
ctggagacctacggagcgctgttcgaccgcacccccgacggacggatcagccagcgcaac
ttcggcggccacacctatccgcgactcgcccacgtcggcgaccgcaccggactcgaactc
atccgcacgatgcagcagaagatcgtgtcgctgcagcaggaggaccacgccgagcacggc
gactacgaggcccgggtgcgggtcttcgccgaatgcaccatcaccgaactgctgaaggac
gacgagggacgcatcgccggtgcgttcggatactggcgcgagaccgggcgtttcgtgttg
ttcgaggcgcccgcggtcgtcatcgccaccggtggtatcggcaagtcgtggaaggtcacg
tcgaactcgtgggagtacacgggcgacggtcacgccctcgccctgcgtgccggcgccacc
ctgatcaacatggagttcgtccagttccacccgacagggatgatctggccgccgagcgtg
aagggcatcctcgtcaccgagggtgtgcgaggcgacggcggagtgctgaagaactccgag
ggggagcggttcatgttctcctatatcccgccggtgttcaaaggccagtacgcggagaca
gaggaggaggccgaccgctggtacgaggaccaggagaacaatcgccgcacgcccgacctg
ctcccgcgcgacgaggtcgcccgcgccatcaactccgaggtcaaggacggccgggggact
ccgcacggcggagtcttcctcgacatcgcctcgcggatgccggctgacgagatcatgcgc
cgcctgccgtcgatgcatcaccagttcaaggaactcgccgacgtcgacatcaccgccgag
gccatggaggtcggcccgacctgccactacgtgatgggcggcatcgaggtcgaccccgac
accgccgctgcggcagtcccggggctgttcgccgccggggaatgttccggtggcatgcac
ggatcgaaccggctgggcgggaattcgctgtccgatctgctggtcttcggtcgccgggca
ggtctcggcgccgccgactacgtgcagagcctcacctcgcggccgatcgtcggcgacgcc
gacatcgacgccgccgcccgtgcggcgctctcgcccttcgatccggccgacaccgatcgc
gccgagaacccgtacaccctgcacaccgacctgcagcaggtcatgcaggatctcgtgggc
atcatccggcgcgcggacgagatcgaacgtgccctgcgcgaactcgacaccctgcgcaca
cggatccgcaacgtcgcggtggagggacaccgtcagttcaacccgggctggcatctcgcc
ctggacctgcggaacatgctcctcgtgtgcgagtgcgtcgcgcgggccgcgttgcagcgc
accgagagccgcggaggacatacccgcgacgaccatccgtcgatggaccccgaatggcgt
cgcaccctgctcgcctgtcgcctggacggcggcgacccgttcgtccccgacgtgacggtc
accaccgaacggcagcaaccgatgcgtcccgacctgctggagctgttcgacatcgacgaa
ctcgggaagtactacaccgacgaggaactcgcggatcatcccggacggaggggttga
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