Rhodococcus pyridinivorans SB3094: Y013_05765
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Entry
Y013_05765 CDS
T02974
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00470
D-Amino acid metabolism
rpy00550
Peptidoglycan biosynthesis
rpy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Y013_05765 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Y013_05765 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpy01011
]
Y013_05765 (murD)
Enzymes [BR:
rpy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Y013_05765 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpy01011
]
Precursor biosynthesis
Amino acid ligase
Y013_05765 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
2-Hacid_dh_C
TrkA_N
NAD_binding_7
Shikimate_DH
ADH_zinc_N
XdhC_C
Pyr_redox
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AHD20206
UniProt:
V9X9S9
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All DBs
Position
complement(1209398..1210888)
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AA seq
496 aa
AA seq
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MNDELERLRGRAVLVAGAGVSGRATIEPLTDLGAHVTVTDRNERALAECAALGARTVDLD
SLVDDPAALREFALVVTSPGFPPDAPLLSRAAGAAIPIWGDIELSWRIDRAEVYGPARRW
LAVTGTNGKTTTTMMLHAILEASGLGSVACGNIGLPVLDALRRDEPRADVLAVELSSFQL
HWAPSVRPEAGVVLNIAEDHLDWHGGIENYIEAKLGALTGAVGVIGLDDPIAGGLGDRSR
AVVTVGFTLGYPQEGELGISGELLVDRAFADSAVLARVDDVTPPGPAGLSDALAAAALAR
AIDVPASAVHDGLRRHRVGPHRAAPVGQVDGVEYIDDSKATNPHAARSSLLARDRVVWIA
GGLLKGARVDDLVAEVAPRLSGAVLLGRDAGDIADALARHAPQVPVVVVDTGDDEAMTDA
TSETDTSSVRRAVAPGADGPAAMRVVVREAAALASPGETVLLAPAAASLDMFADYAERGR
SFASAVEELRGGGTQP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgaactcgaacggctcagaggacgggcggtgctcgtcgccggggcaggggtg
tccggccgcgcgacgatcgaaccccttaccgatctcggcgcccacgtcaccgtcaccgac
cgcaacgagcgggcactggccgagtgcgcggcgctcggcgcccggacggtcgacctcgac
agtctcgtcgacgaccccgctgcgctgcgcgagttcgccctggtggtcacgagtcccgga
ttcccgcccgacgccccgctgctctcgcgcgcggccggcgcggcgatccccatctggggc
gacatcgaactgtcctggcgcatcgaccgcgccgaggtctacggaccggcccgtcggtgg
ctggccgtcaccgggacgaacggcaagaccactacgaccatgatgctgcacgcgatcctc
gaggcctccggcctcggcagcgtcgcgtgcggcaacatcggtcttcccgtgctcgacgcc
ctgcgccgcgacgaaccgcgggccgacgtactcgccgtcgagttgtcgtccttccagctg
cactgggcgccctcggttcggcccgaggccggcgtcgtgctcaacatcgccgaggaccat
ctcgactggcacggcggcatcgagaactacatcgaggccaaactcggtgcgctcaccggc
gccgtcggggtcatcggtctcgacgacccgatcgccggtggtctcggcgaccggtcccgt
gccgtggtcaccgtgggcttcaccctgggctatccacaggaaggcgaactcgggatcagc
ggcgaactgctcgtcgaccgggcgttcgccgattccgccgtgctcgcccgggtggacgac
gtgacgccgcccggccctgccggactgtccgacgcactcgcggccgcagccctcgcccgg
gccatcgacgtgcccgcctcggcggtgcacgacggcctgcgacggcaccgcgtcggtccg
caccgcgccgcgccggtcgggcaggtcgacggcgtcgagtacatcgacgattcgaaggcg
accaatccgcacgcggcccgtagttcgctgctcgcccgcgaccgcgtggtgtggatcgcc
ggtggtctgctcaagggcgcccgcgtggacgacctggtcgccgaggttgcgccgcgactg
tccggagccgtgctgctcggccgcgacgccggcgacatcgccgacgcgctggcgcgacac
gccccgcaggtcccggtcgtcgtcgtggacacgggcgacgatgaagcgatgaccgatgcg
acgagcgagaccgacacgtcttcggtgaggagggccgtggcaccgggcgccgacggtcct
gccgcgatgcgcgtggtggtccgggaagcggccgcactcgcctcgccgggggagacggtg
ctgctcgccccggccgcggcatcgctcgacatgttcgccgattacgcggagcgcggccgg
agtttcgcgtccgcggtcgaggaactccgcgggggcgggacgcaaccgtga
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