Rhodococcus pyridinivorans SB3094: Y013_05935
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Entry
Y013_05935 CDS
T02974
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy03030
DNA replication
rpy03430
Mismatch repair
rpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Y013_05935
03430 Mismatch repair
Y013_05935
03440 Homologous recombination
Y013_05935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpy03032
]
Y013_05935
03400 DNA repair and recombination proteins [BR:
rpy03400
]
Y013_05935
Enzymes [BR:
rpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Y013_05935
DNA replication proteins [BR:
rpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Y013_05935
DNA repair and recombination proteins [BR:
rpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Y013_05935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
AHD20240
UniProt:
V9XE29
LinkDB
All DBs
Position
1247628..1249376
Genome browser
AA seq
582 aa
AA seq
DB search
MTSPQPSALGVQLGFDELDTPLRETTFVVVDLETTGGKAAEDAITEIGAVKIRGGEVLGE
FATLVDPGRPIPPYIVQLTGITTAMVYAAPKVEEVLPAFLEFASGAVLVAHNAGFDVGFL
EAATAQCELAWPRFQVLCTVKLARRVLGRDEAPSVKLSALAELFRVSTVPTHRALDDARA
TVDVLHALIERVGNQGVHSLTELRDYMPVVTAEQRAKRALAAHLPRKPGVYMFRGPSDEV
LYVGTAVDLHRRVRTYFTGSETRPRLREMVALTTRIDHVECAHGLEAGVRELRLIAAHTP
PYNRRSKYPMRGWWIILTDEAFPRLAVSRTPGPDSVGPFSVRADAADVAALLAEMCGLRT
CTRRIGRTARHGDRCPPVAVGGCAAAAFGVQDASAYAAQVERARAVVRGTADDAVESAQQ
RLDALVRDQLFENAARLRDRLATALVALRRTQRLAALAAVDELVAARPRAEGGWEFAVVR
AGRLASAGVAPRGVRPMPVVEAIVAAAETVRPSPGPLRGASPEEIGLVARWLDGEGIRIV
RASEGWCEPTRGAGRWSTWAELARDARAVRRLLSADDPHRLG
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgccgcaaccatccgccctcggcgtgcaactcggtttcgacgagctcgacact
ccgctgcgcgagaccaccttcgtcgtcgtcgacctcgagacgaccggcgggaaggcagcc
gaggacgccatcacagagatcggcgcggtgaagatccgcgggggcgaggtgctcggcgag
ttcgcgaccctcgtcgatccgggacgacccatccccccgtacatcgtgcagctcaccggc
atcaccaccgcgatggtctatgcggcgcccaaggtcgaggaggtgctgcccgccttcctg
gaattcgcgtccggagcggtgctcgtcgcacacaacgccggattcgacgtcggcttcctc
gaggcggccacggcgcagtgcgaactcgcgtggccccgcttccaggtgctgtgcaccgtc
aagctggcccgccgcgtcctcggacgcgacgaagcgccgtcggtgaagctgtccgcgctg
gccgaactgttccgggtctccaccgtgcccacccaccgcgccctggacgacgcacgcgcc
accgtggacgtcctgcacgccctcatcgaacgggtcggcaaccagggcgtccacagcctc
accgaactgcgcgactatatgccggtggtcaccgccgagcagagggccaaacgcgcactc
gccgcgcatctgccgcgcaaaccgggtgtctacatgttccgcggcccgtcggacgaggtg
ctgtacgtcggcacggcggtcgacctgcaccggcgtgtccgtacctatttcacgggctcc
gagacgcgaccgcggttgcgcgagatggtcgcgctcaccacacgcatcgatcacgtcgaa
tgcgcccacgggctcgaggccggcgtccgcgaactccggttgatcgcggcccacacccct
ccctacaaccgccggtcgaaatatccgatgcgcggttggtggatcatcctcaccgacgag
gcgttcccgcgcctcgccgtgagccgcacccccggacccgactcggtcggcccgttctcg
gtgcgcgccgacgccgcggatgtcgcggcactgctcgcggagatgtgcggtctgcgcacg
tgcacgcgcaggatcggccgtacggcccgccacggcgaccgctgcccgcccgtcgcggtc
gggggctgcgccgcagccgccttcggggtccaggacgcctccgcctacgcagcccaggtc
gagcgtgcgcgcgcggtcgtccgcggaaccgccgacgacgccgtcgaatcggcgcagcag
cgactcgacgccctcgtgcgcgaccagctgttcgagaacgccgcccgcctccgcgaccgc
ctcgccaccgccctcgtcgcgctgcggcgcacgcaacgcctcgcggcgctggcggccgtc
gacgaactcgtcgccgcgcgaccgcgggccgagggcgggtgggagttcgccgtcgtgcgc
gccggtcgtctcgcgtccgccggagtggcaccgcgcggtgtgcgcccgatgcccgtcgtc
gaggcgatcgtcgccgcggccgagacggtgcggccgtcacccggcccgctccggggcgcg
tccccggaggagatcggtctggtcgcacgatggctcgacggcgagggcatccgcatcgtc
cgggcgagcgagggctggtgcgaaccgacacggggtgcgggccggtggagcacgtgggcc
gagctcgcccgcgacgcccgcgcggtccgcaggctcctctccgccgacgacccgcaccgc
ttaggctga
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