Rhodococcus pyridinivorans SB3094: Y013_08055
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Entry
Y013_08055 CDS
T02974
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00020
Citrate cycle (TCA cycle)
rpy00480
Glutathione metabolism
rpy00720
Other carbon fixation pathways
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
rpy01120
Microbial metabolism in diverse environments
rpy01200
Carbon metabolism
rpy01210
2-Oxocarboxylic acid metabolism
rpy01230
Biosynthesis of amino acids
rpy04146
Peroxisome
Module
rpy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpy_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Y013_08055
09102 Energy metabolism
00720 Other carbon fixation pathways
Y013_08055
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Y013_08055
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Y013_08055
Enzymes [BR:
rpy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Y013_08055
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
AHD20626
UniProt:
V9XB08
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Position
complement(1688161..1689378)
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AA seq
405 aa
AA seq
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MSKIKVEGKVVELDGDEMTRIIWQFIKDKLIHPYLDVDLEYYDLGVENRDATDDQVTVDA
ANAIKKHNVGVKCATITPDEARVEEFGLKKMWRSPNGTIRNILGGTIFRAPIIISNVPRL
VPGWTKPVIVGRHAFGDQYRATDFKVDRPGTVTITFTPEDGSEPIQHEVCQIPEDGGVVM
GMYNYKKSIQDFARASLSYGLQRNYPVYLSTKNTILKAYDGMFKDEFQRIYEEEFKAEFD
AAGLTYEHRLIDDMVASSLKWEGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTPDG
KTVEAEAAHGTVTRHYRQHQQGKPTSTNPIASIFAWTRGLEHRGKLDNTPEVIEFAQQLE
DVVIKTVEAGQMTKDLALLVGPEQGWLTTEEFLAALDENLQKARA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaaggttgaaggtaaggtcgtcgagctcgacggcgacgagatgacccgc
atcatctggcagttcatcaaggacaagctgatccacccgtacctggacgtggatctcgag
tactacgacctcggcgtggagaaccgcgacgccaccgacgaccaggtgacggtcgatgcg
gcgaacgccatcaagaagcacaacgtcggcgtcaagtgcgccaccatcacccccgacgaa
gcgcgtgtcgaggagttcggcctgaagaagatgtggcggtcgcccaacggcaccatccgt
aacatcctcggcggcaccatcttccgcgcgcccatcatcatctcgaacgtgccgcgtctg
gtgccgggctggaccaagcccgtcatcgtcggccgtcacgcgttcggcgatcagtaccgc
gccaccgacttcaaggtcgaccgcccgggcaccgtcaccatcaccttcacgcccgaggac
ggcagcgagccgatccagcacgaggtctgccagatccccgaggacggcggcgtcgtgatg
ggtatgtacaactacaagaagtccatccaggacttcgcgcgcgcctcgctctcgtacggc
ctgcagcgcaactacccggtctacctgtcgaccaagaacacgatcctgaaggcctacgac
ggcatgttcaaggacgagttccagcggatctacgaggaagagttcaaggcggagttcgac
gccgccggtctcacctacgagcaccgcctcatcgacgacatggtcgcatcgtccctcaag
tgggagggcggctacgtctgggcctgcaagaactacgacggcgacgtccagtccgacacc
gtcgcgcagggctacggctcgctggggctgatgacctccgtcctgatgaccccggatggc
aagaccgtcgaggcggaggccgcacacggcaccgtcacccggcactaccgtcagcaccag
cagggcaagccgacgtcgaccaacccgatcgcgtcgatcttcgcctggacccgtggcctc
gagcaccgcggcaagctggacaacacccccgaggtcatcgagttcgcgcagcagctcgag
gacgtcgtcatcaagaccgtcgaagccggtcagatgaccaaggacctcgccctgctcgtc
ggccccgagcagggctggctgaccaccgaggagttcctcgcagcactcgacgagaacctg
cagaaggctcgcgcctga
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