Rhodococcus pyridinivorans SB3094: Y013_09345
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Entry
Y013_09345 CDS
T02974
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00860
Porphyrin metabolism
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
rpy01120
Microbial metabolism in diverse environments
rpy01240
Biosynthesis of cofactors
Module
rpy_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
rpy_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Y013_09345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpy04147
]
Y013_09345
Enzymes [BR:
rpy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Y013_09345
Exosome [BR:
rpy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Y013_09345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
AHD20858
UniProt:
V9XER7
LinkDB
All DBs
Position
complement(2012766..2013743)
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AA seq
325 aa
AA seq
DB search
MFPDIRPRRLRSTPAIRRLVAETSLEPRHLVLPMFVADGLDEPREIASMPGVYQHTADSL
RKAAAAAVSAGVGGLMLFGVPSPEDKDARGSAASDPGGVLNRALRSLRSELGDATVIMAD
TCLDEFTDHGHCGVLTDTGVVDNDATLERYAEMAVAQAEAGAHLLGPSGMMDGQIGFIRS
ALDEAGHTEVGQLAYSAKYASAFYGPFRDAVGSSLEGDRRTYQQDPANRRESLHEVDLDL
AEGADMVMVKPAMSYLDVLREVADRSPVPVAAYQISGEYSMITAAAQKGWIDRDAAILES
LVGIRRAGADVVLTYWAAEVAGRLS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccgacatccgtccccgccggctgcgcagcacacccgccatccgacggctcgtg
gcagaaacctccctcgaaccccgccacctcgtgctcccgatgttcgtggccgacggcctc
gacgagccgcgcgagatcgcgtcgatgcccggggtgtaccagcacaccgccgattcgctg
cgcaaggccgcggccgcggccgtgtccgccggtgtcggcggcctgatgctcttcggtgtg
cccagccccgaggacaaggacgcccgtggttccgcggcgagcgatcccggcggtgtgctc
aaccgcgcgctgcggtcgctgcgcagcgaactcggcgacgccacggtgatcatggccgac
acctgcctcgacgagttcaccgatcacggccactgcggtgtgctcaccgacaccggcgtc
gtcgacaacgacgcgaccctcgagcgttacgccgagatggccgtcgcgcaggccgaggcc
ggggcgcacctgctcggcccgagcggcatgatggacggccagatcggtttcatccggtcc
gcgttggacgaggccgggcacaccgaggtcggtcagctcgcctactccgcgaaatacgcc
tcggcgttctacggtcccttccgcgacgccgtcggctcgtccctcgagggagatcgccgc
acctaccagcaggatccggcgaaccgtcgcgagtcgctgcacgaggtggacctcgacctc
gccgagggcgccgacatggtgatggtcaagccggcgatgtcgtatctcgacgtgctgcgc
gaggtcgccgaccgctcgcccgtcccggtggccgcctaccagatctcgggggagtactcg
atgatcaccgcggccgcgcagaagggctggatcgatcgcgatgcggcgatcctcgaatcg
ctggtcggcatccggcgggccggtgcggacgtcgtcctcacctactgggccgccgaggtc
gcgggtcgcctgtcatga
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