Rhodococcus pyridinivorans SB3094: Y013_09740
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Entry
Y013_09740 CDS
T02974
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
rpy
Rhodococcus pyridinivorans SB3094
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpy03021
]
Y013_09740
Transcription machinery [BR:
rpy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Y013_09740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR
HTH_3
MarR_2
HTH_Crp_2
HTH_24
HTH_31
HTH_AsnC-type
DUF7343
HTH_23
Sigma70_ECF
HTH_20
LacI
HTH_IclR
HTH_AraC
HTH_Tnp_4
DUF134
Motif
Other DBs
NCBI-ProteinID:
AHD20933
UniProt:
V9XEY5
LinkDB
All DBs
Position
2082184..2082966
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AA seq
260 aa
AA seq
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MTRNTGRSSDEYADVTETLRTLLALEEGDPGRIRIRDAVVERCLPLAEHIARRFDGRGEA
FEDLLQVARLGLVNAVDRFDPERGSDFVSFAVPTIMGEVRRHFRDAGWAVRVPRRMKELH
LSLSKATSELSQQLGRAPTASELAEVLGIDQEEVLQGLVAGNAYQTVSVDRSSPSGDDGL
TLADTLGDYDAALDEVENHEALRPLLEALPARERTVVLLRFFGNMTQTQIAERVGVSQMH
VSRLLTKTLAQLRDQLGDNF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcaacacgggtaggtcgagcgacgagtacgccgacgtcaccgaaacgttgaga
acactcctcgcactcgaggagggcgaccccggtcgcatccgcatccgcgacgcagtggtc
gagcggtgcctgccgctcgccgagcacatcgcccggcgcttcgacggccgtggtgaggcc
ttcgaagatctgctgcaggtcgcgcgcctgggcctggtcaacgctgtcgaccgtttcgac
cccgaacgcggttcggatttcgtctccttcgcggtccccacgatcatgggcgaggtgcgc
cggcacttccgtgacgccggctgggcggttcgtgtgccgcgacgcatgaaggaactgcat
ctgtccctgagcaaggccacgtccgagctctcccagcagctcggacgtgcacccaccgcc
tccgagctcgccgaggtactcggcatcgatcaggaggaggtgctgcagggtctcgtggcc
ggcaacgcctaccagaccgtgtcggtcgaccggtcgtccccgtccggcgacgacgggctc
accctcgccgacacgctcggcgactacgacgccgcgctcgacgaggtcgagaaccacgag
gcgctgcgtccgctgctcgaggcccttccggcccgcgaacgcacggtcgtgctgctgcgc
ttcttcggcaacatgacgcagacgcagatcgccgagcgcgtgggtgtctcgcagatgcat
gtgtcgcgtctgctcacgaagaccctcgcgcagctccgcgatcagctcggcgacaacttc
tga
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