Rhodococcus pyridinivorans SB3094: Y013_10215
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Entry
Y013_10215 CDS
T02974
Name
(GenBank) peptide ABC transporter permease
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Y013_10215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpy02000
]
Y013_10215
Transporters [BR:
rpy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Y013_10215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHD21025
UniProt:
V9XHA6
LinkDB
All DBs
Position
complement(2184561..2186189)
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AA seq
542 aa
AA seq
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MSISSSSASRFVVTAAATAVLGAALTACGTGAAANSEPTGDPQPGGTLRYGLSVPPTCAD
PAQAASNQTIYVARQVVDSLTDQDPATGEIVPWLAESWESNADGTQFTFRLKEGVTFSDG
TPLTADSVKKNFDAIVNTLGGVKAPQAVGYLAGYAGTTVVDDRTAQVNFSVPNAPFLQAT
ASHQLGLLSDADTAKSAEERCAGDLSGTGPFVYEDYQQDKSATLVKRTGYSWGSEAFGHD
GEAYLDRIEFTIVPESGVRTGSLASGQLDAISDALPQDAAQIESAGGRILTTPNPGIPFG
FQPNLSRGVLTDPAVRSAIVPAINRQELVDTVLGPDFRPATSTLASATPGYVELADVTYD
PVKAEKILDEAGWVPGPDGIRVKDGQRLSFPVLFSSVFAGNQAILELVQQQLRAVGIDLQ
LDLVSTPENTARQNAGDFEASYYNSTRADGDILRTAFGLDGRNLNQRNPIPDLDDVLAQQ
LSTTDPAARAELIGRAQQLVLDNGLWIPTVELSQAIGAGPNVADLKFEASARLQFFDTWL
GE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
ttgtccatctcgtcctcctccgcgtcccggttcgtcgtcacggccgccgccaccgccgta
ctgggcgcagcgctgaccgcctgcggaaccggtgccgcggcgaactcggagcccaccggc
gacccgcagcccggcggcaccctgcggtacggattgtcggtcccacccacctgcgccgat
cccgcgcaggccgccagcaaccagaccatctacgtcgcccggcaggtcgtcgactcgctc
accgaccaggaccccgcgaccggtgagatcgtgccgtggctggcggagagctgggaatcg
aacgccgacggcacgcagttcactttccggttgaaggaaggcgtgaccttcagcgacggc
accccgctgaccgcggactccgtgaagaagaacttcgacgcgatcgtgaacaccctcggc
ggggtgaaggcgccgcaggccgtggggtatctcgcgggatacgccggcactacggtcgtc
gacgaccggaccgcacaggtgaacttctccgtgccgaacgcgccgttcctgcaggccacc
gcaagtcatcaactgggcctgctctcggatgccgacaccgccaagagcgccgaggaacgc
tgcgccggtgacctgtcgggcaccggcccgttcgtctacgaggactaccagcaggacaag
tccgccaccctcgtcaagcgcacgggttactcgtggggttcggaggcattcgggcacgac
ggtgaggcctatctcgaccggatcgagttcacgatcgtccccgaatccggtgtccgcacc
ggatcgctcgcctccggtcagctcgacgccatctcggatgcgctgccgcaggacgcggcg
cagatcgaaagtgccggcggccgcatcctgaccactccgaatccgggtatcccgttcggc
ttccaacccaacctcagtcgcggtgtcctcaccgacccggccgtgcgcagcgcgatcgtc
ccggcgatcaaccggcaggaactggtggacacggtcctcggaccggacttccgccccgcg
accagcacgctcgcgtccgcgacccccggttacgtcgaactcgccgacgtcacctacgac
ccggtgaaggccgagaagatcctcgacgaggccggctgggtgcccggtcccgacggcatc
cgagtcaaggacgggcagcgcctgagcttccccgtgctgttcagctcggtgttcgccggc
aaccaggccattctcgaactggtgcagcaacagttgcgggcggtgggaatcgacctgcag
ctcgacctcgtctccactccggagaacaccgcacgccagaatgccggcgacttcgaggcg
tcctactacaacagcacccgcgccgacggcgacatcctgcgcacggcattcgggctcgac
gggcggaacctcaaccagcgcaatcccattccggatctcgacgacgtgctcgcccagcag
ctgtccacgaccgacccggccgcacgtgccgagctcatcggccgggcgcagcagctcgtc
ctcgacaacggactgtggatcccgacggtcgaactgtcgcaggcgatcggtgccggaccg
aacgtcgccgacctgaagttcgaggcgtcggcgcgactgcagttcttcgacacctggctg
ggcgagtag
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