Rhodococcus pyridinivorans SB3094: Y013_10535
Help
Entry
Y013_10535 CDS
T02974
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00860
Porphyrin metabolism
rpy01100
Metabolic pathways
rpy01240
Biosynthesis of cofactors
Module
rpy_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Y013_10535
Enzymes [BR:
rpy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
Y013_10535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
AmpE
Motif
Other DBs
NCBI-ProteinID:
AHD21081
UniProt:
V9XCB7
LinkDB
All DBs
Position
2250871..2251788
Genome browser
AA seq
305 aa
AA seq
DB search
MKHRALGLALGYAADQLVGDPQRWHPVSGFGKLARAAEGRLYADHRVAGVVFTSLLVGSA
GALGYVADHATRGRPVPAVAVTALTTWTVLGGRSLGFEARTIDAQLRDGDLAAARQQVTH
LVGRDPSRLDENGIARATIESVAENTSDAVVAPLWWGAVLGPAGLLGYRAANTLDARVGH
RTPRLERFGWASARFDDLLNLVPARLTALLAVALGDDGRGAVRAWRRDARQHPSPNAGPV
EAAFAGALGIRLGGSNVYHGVVEDRGTLGDGPAPAPEDIGRTARLASKVGLGAVATAIAV
ALVRR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcacagggcactcggactggcgctcggctacgccgccgaccaactcgtcggcgac
ccgcagcggtggcatcccgtgagcggcttcgggaagttggcgcgcgccgccgagggccgg
ctgtatgccgaccaccgcgttgccggggtggtgttcacctcgctgctggtcggctctgcc
ggagcgctgggatacgtcgccgaccacgcgacccgcggtcgtccggtgccggcggtggcg
gtcacggcgctgaccacctggaccgtgctcggcggccgctccctcggattcgaggcccgg
acgatcgacgcccaactccgcgacggcgatctcgccgcggcgcggcaacaggtgacccac
ctggtgggccgcgacccgtctcggctcgacgagaacgggatcgcgcgcgccacgatcgag
tcggtcgccgagaacacctccgacgccgtcgtcgccccgctgtggtggggtgcggtcctc
ggtccggccggcctgctcgggtaccgcgccgcgaacaccctggacgcgcgcgtcggtcac
cgcacgccgcggctcgaacggttcggctgggcctcggcccggttcgacgacctgctcaat
ctcgtccccgctcgcctcaccgccctgctggctgtcgcactcggtgacgacggccggggc
gcggtccgggcgtggcgccgggacgcccgtcagcatccgagtccgaatgccggtccggtc
gaagcggcgttcgccggtgctctcgggatccggctcggcggctcgaacgtctatcacggt
gtggtcgaggatcgcggcacgctcggcgacggacccgcgccggccccggaagatatcggc
cgtaccgcgcgactcgcctccaaggtcggactcggagccgtggcgaccgccatcgcggtc
gccctcgtccgtcgatag
DBGET
integrated database retrieval system
