Rhodococcus pyridinivorans SB3094: Y013_12640
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Entry
Y013_12640 CDS
T02974
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00010
Glycolysis / Gluconeogenesis
rpy00020
Citrate cycle (TCA cycle)
rpy00260
Glycine, serine and threonine metabolism
rpy00280
Valine, leucine and isoleucine degradation
rpy00310
Lysine degradation
rpy00380
Tryptophan metabolism
rpy00620
Pyruvate metabolism
rpy00630
Glyoxylate and dicarboxylate metabolism
rpy00640
Propanoate metabolism
rpy00670
One carbon pool by folate
rpy00785
Lipoic acid metabolism
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
rpy01120
Microbial metabolism in diverse environments
rpy01200
Carbon metabolism
rpy01210
2-Oxocarboxylic acid metabolism
rpy01240
Biosynthesis of cofactors
Module
rpy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rpy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Y013_12640
00020 Citrate cycle (TCA cycle)
Y013_12640
00620 Pyruvate metabolism
Y013_12640
00630 Glyoxylate and dicarboxylate metabolism
Y013_12640
00640 Propanoate metabolism
Y013_12640
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Y013_12640
00280 Valine, leucine and isoleucine degradation
Y013_12640
00310 Lysine degradation
Y013_12640
00380 Tryptophan metabolism
Y013_12640
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Y013_12640
00670 One carbon pool by folate
Y013_12640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpy04147
]
Y013_12640
Enzymes [BR:
rpy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Y013_12640
Exosome [BR:
rpy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Y013_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
NAD_binding_8
DAO
FAD_oxidored
GIDA
HI0933_like
FAD_binding_3
Lys_Orn_oxgnase
AlaDh_PNT_C
3HCDH_N
Thi4
XdhC_C
Amino_oxidase
ANAPC4_WD40
Motif
Other DBs
NCBI-ProteinID:
AHD21447
UniProt:
V9XJG2
LinkDB
All DBs
Position
2724907..2726307
Genome browser
AA seq
466 aa
AA seq
DB search
MTEKYDVLVVGSGPGGYVAAIRAAQHGLRTAIVERDRLGGICLNWGCIPTKALLHGADVA
HTLVNLQPLGFSTSSVEFDMGRLVEFSRSVSGRLSDGIGYLMKKNDIDVVEGAARLLDKG
VVAVTTADETVSEYRADHVILATGARPRPVPGVIPDGDRIWTYFDALVPTDLPKSLLVIG
SGAVGVEFASLYKDLGTDVTLVEMAPQIMPVEDFAVASHVRRQFEQRGIKIHTGASVSEL
AAGPDTVTVTVQSTAGTVDELTVDRVLVAAGIQGNVEDLGLTELGIEVEHGFITTDQWCR
TSAFGVYAIGDVAGAPCLAHKASHEAVLCVDKLAGVQHVRPLDRDYVPGCTYARPQVASL
GLTEEQARATGRRLQVGQFDLQASGKALAIGEADGFVKTIFDADSGELLGAHMVGPDVTE
QIQGFGIARALEATADDLAEVVFAHPTLSEAMHESVLSALGRPINM
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaaatacgacgtcctcgtcgtcggcagcggaccgggtggttatgttgcggcc
atccgcgccgcgcagcacggtttgcgcaccgcgatcgtcgaacgggaccggctcggaggg
atctgcctgaactggggatgcattcccaccaaggccttgctgcacggcgccgatgtcgcc
cacacgttggtgaatctccagcccctcgggttcagcaccagtagtgtggaattcgatatg
ggacgcctcgtcgagttcagcaggtcggtgtccggacgactgtccgacggtatcgggtac
ctgatgaagaagaacgacatcgatgtcgtcgaaggagcggcgcgattgctcgacaagggc
gtcgtcgcagtgacgacagcagacgagacggtgtccgaataccgggccgaccacgtgatc
ctggcaaccggagcccggccgcgtccggttcccggcgtcattcccgacggcgaccgcatc
tggacatacttcgacgctctcgtcccgacggatctgccgaaatcattgttggtcatcggc
tctggcgcagtcggcgtcgaattcgcgagcttgtacaaggatctcggcaccgacgtcacc
ctcgtagagatggcgccgcagatcatgccggtggaggacttcgctgtcgcaagccacgta
cggcgtcagttcgagcaacgaggtatcaagattcacaccggcgcctcggtatccgaactg
gcagccggtccggatactgtcaccgttaccgtgcagtcgaccgccggaaccgtcgatgaa
ctcactgtggacagggtgctcgtcgcagccggcatccagggcaacgtcgaggatctcggc
ctcacagaacttggcatcgaggtcgaacacggtttcatcaccaccgatcagtggtgtcgc
accagcgcattcggggtatacgcgatcggcgacgtggcaggcgcaccttgtctcgcccac
aaggcgagccacgaggctgtgctttgcgtggataagcttgcaggtgtgcagcacgtccgg
ccgttggaccgggactacgttccgggctgtacgtacgcgaggccgcaggtcgccagcctc
ggtctcaccgaagagcaagcgcgggcgaccgggcgtcgcctgcaagtcgggcaattcgat
ctgcaagcatccggaaaggcactcgctatcggtgaagccgacggcttcgtgaaaacgatc
ttcgacgccgacagcggtgaacttctcggtgcccatatggtcggcccggacgtcaccgag
cagattcagggcttcggtatcgcccgagccctggaggcaactgccgacgatctcgccgaa
gtcgtcttcgcacacccgacactgtctgaagcaatgcacgaatcggtcctgtccgcgcta
ggccgtccgatcaacatgtag
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