Rhodococcus pyridinivorans SB3094: Y013_14205
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Entry
Y013_14205 CDS
T02974
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Y013_14205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpy03400
]
Y013_14205
Enzymes [BR:
rpy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Y013_14205
DNA repair and recombination proteins [BR:
rpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Y013_14205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AHD21727
UniProt:
V9XG41
LinkDB
All DBs
Position
3049513..3050316
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AA seq
267 aa
AA seq
DB search
MRLATWNVNSVRARTDRILDWLQRTDTDVLAMQETKCKDEQFPYERFEELGYRVAHVGLS
QWNGVAIASRVGLDDVQIGFEDQPGFSKDPEVDPALEARAIGATCAGVRVWSLYVPNGRD
LNDPHYTYKLDWLAKLRADAHAWATAAPGQPIALVGDWNVAPTDDDVWDPAFFEGKTHTS
QPERDAFHAFADVGYTDVVRPYAPGPGVYTYWDYTQLRFPKKQGMRIDFVLGSPAFAARV
TGAEIDRNERKGKGASDHAPVVVDLDL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccttgctacctggaatgtgaactccgtccgtgcccgtaccgaccgcatcctcgac
tggttgcagcgaaccgacacggatgtgctcgcgatgcaggaaaccaagtgcaaggacgag
cagttcccgtacgaacgcttcgaggagctcggctaccgcgtcgcgcacgtcggactgagc
cagtggaacggtgtggccatcgcgtcgcgcgtgggcctcgacgacgtgcagatcggcttc
gaggaccagcccggtttctccaaggacccggaggtcgatccggcgctcgaggcgcgggcg
atcggggcgacgtgcgcgggtgtgcgcgtgtggagcctgtacgtccccaacggccgcgac
ctcaacgacccgcattacacctacaagctcgactggctcgccaagctgcgcgccgacgcg
cacgcctgggccaccgcagcgcccgggcagcccatcgcgctggtcggcgactggaacgtc
gcccccaccgacgacgacgtgtgggatccggccttcttcgagggcaagacgcacacttcg
cagcccgagcgcgacgccttccacgcgttcgccgacgtcggctacaccgacgtcgtccgt
ccgtacgcgcccggccccggggtctacacctactgggactacacccagctgcgcttcccc
aagaagcagggcatgcggatcgacttcgtcctcggatcaccggccttcgcggcacgggtg
acgggcgccgagatcgaccgcaacgaacgcaagggcaagggcgcgagcgaccacgcaccg
gtcgtcgtcgacctcgacctctga
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