Rhodococcus pyridinivorans SB3094: Y013_16555
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Entry
Y013_16555 CDS
T02974
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpy03032
]
Y013_16555
03400 DNA repair and recombination proteins [BR:
rpy03400
]
Y013_16555
Enzymes [BR:
rpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Y013_16555
DNA replication proteins [BR:
rpy03032
]
Prokaryotic type
DNA Topoisomerases
Y013_16555
DNA repair and recombination proteins [BR:
rpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Y013_16555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AHD22143
UniProt:
V9XIC4
LinkDB
All DBs
Position
3552066..3554570
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AA seq
834 aa
AA seq
DB search
MTDTTLPPEGPGHDRIEPVDIQQEMQSSYIDYAMSVIVGRALPDVRDGLKPVHRRVLYAM
FDNGFRPDRGYVKSARAVAETMGNYHPHGDASIYDTLVRLAQPWSMRYPLVDGQGNFGSR
GNDGAAAMRYTECRLTPLAMEMLREIDHETVDFQPNYDGRTQEPTVLPSRIPNLLINGSG
GIAVGMATNIPPHNLGEVAEAIYWALDNFEADEETTLAAVMERIKGPDFPTAGLITGTQG
IHDAYTTGRGSVKMRGVVEIEEDSKGRTSIVITELPYMVNPDNLITSIAEQVRDGKIAGI
SDIHDESSDRVGMRIVVTVRRDAVAKVVLNNLYKHTQLQTSFGCNMLSIVDGVPRTLRLD
QMIRLYVNHQIEVIVRRTRYLLRKAEERAHILRGLVKALDALDEVIALIRASQTVDIARA
GLIDLLTVDEIQADAILAMQLRRLAALERQKIVDDLAEIEREIEDYKDILARPERQRAIV
RDELKEIVDKYGDERRTRLVAADGDVNDEDLIAREDVVVTITETGYAKRTRTDLYRSQKR
GGKGVKGAELKQDDIVKHFFVTSTHDWLLFFTTKGRVYRAKAYELPEANRTARGQHVANL
LAFQPDERIQGVIRLKTYEDAPYLVLATRNGLVKKSRLSDFDSNRSGGIVAINLRGDDEL
VGAVLCSAEDDLLLVSQQGQSIRFSATDEALRPMGRATSGVQGMRFNGEDKLLSLNVVKE
GTYLLVATSGGYAKRTPMEDYPVQGRGGKGVLTIQYDRKRGNLVGARIVEDDDELYAITS
SGGVIRTAAKQVRKAGRQTKGVRLMNLAEGDTLLAIARNADEPDEADAAGAKES
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccacgttgcctccggaggggccggggcacgaccgcatcgagcccgtcgac
atccagcaggagatgcagagcagttacatcgattatgcgatgagcgtgatcgtgggccgt
gctctgcccgacgtgcgtgacggtctcaaaccggtgcaccgtcgcgtgctctatgcgatg
ttcgacaacggcttccgccccgaccgcgggtacgtgaagtcggcgcgcgcggtcgccgag
accatgggcaactaccacccgcacggcgacgcgtcgatctacgacacgctcgtgcgtctg
gcgcagccgtggtcgatgcgctatccactcgtcgacggccagggcaacttcggttcccgc
ggcaacgacggcgccgccgccatgcggtacaccgagtgccggctcacgccgctcgcgatg
gagatgctgcgggagatcgaccacgaaacggtcgatttccagccgaactacgacggccgc
acgcaggaaccgacggttctccccagccgtatccccaacctgttgatcaacggttcgggc
ggtatcgcggtcggtatggccaccaacatcccgccgcacaatctcggggaggttgcggag
gccatctactgggcgctcgacaacttcgaggccgacgaggagaccaccctcgccgcggtc
atggagcggatcaagggaccggacttcccgaccgccggcctgatcacgggcacgcagggc
atccacgatgcctacacgaccggtcgcggatcggtgaagatgcgcggcgtcgtggagatc
gaagaggactccaagggccgcaccagcatcgtcatcaccgagctgccgtacatggtcaac
ccggacaacctcatcacgtcgatcgccgaacaggtccgcgacggcaagatcgcgggcatc
tccgacatccacgacgagtcgtccgaccgcgtgggcatgcgcatcgtcgtcactgtccgc
cgcgacgcggtggccaaggtggttctcaacaacctctacaagcacacgcagctgcagacg
agtttcggctgcaacatgctgtcgatcgtcgacggggtgccgcgcacgctgcgcctcgac
cagatgatccggttgtacgtcaaccaccagatcgaggtcatcgtccggcgtacgcggtac
ctgctgcgcaaggccgaggaacgcgcccacattttgcgcggcctggtcaaggccctcgac
gcgctcgacgaggtcatcgcgctcatccgcgcgtcgcagaccgtcgacatcgcgcgcgcc
ggcctgatcgatctgctcacggtcgacgagatccaggccgacgccatcctggcgatgcag
ctgcgtcgcctggctgctctcgagcgtcagaagatcgtcgacgacctcgccgagatcgag
cgcgagatcgaggactacaaggacatcctggcccgtccggagcggcagcgcgccatcgtc
cgcgacgagctgaaggagatcgtcgacaagtacggcgacgagcgccgcacgcggcttgtc
gcggccgacggcgatgtcaacgacgaggacctcatcgcacgtgaggacgtcgtcgtcacc
atcaccgagaccggttacgccaagcgcacgcgcaccgacctgtaccgctcgcagaagcgc
ggcggcaagggcgtcaagggtgccgagctcaagcaggacgacatcgtcaagcacttcttc
gtgacgtccacgcacgactggctgctgttcttcacgacgaagggccgcgtctaccgcgcg
aaggcgtacgagctgcccgaggcgaatcgcacggcgcgtggtcagcacgtcgcgaacctc
ctggccttccagcccgacgagcgcatccagggcgtcatccgcctcaaaacctacgaggat
gcgccgtacctggtgctcgcgacccgcaacggcctggtcaagaagtcgcgcctgtcggac
ttcgactccaaccgttcgggcggcatcgtcgcgatcaacctgcgcggcgacgacgagctc
gtcggcgcggtgttgtgctccgccgaggacgatctgctgctcgtctcgcagcagggccag
tcgattcgtttctcggccaccgacgaggcgctgcgtccgatgggccgcgcgacctccggt
gtgcagggcatgcggttcaacggcgaggacaagctgctctcgctcaacgtcgtcaaggag
ggcacgtacctgctggtcgcgacctcgggtggttacgccaagcgcaccccgatggaggac
tacccggtccaaggtcgcggcggtaagggtgttctgaccatccagtacgaccgcaagcgt
ggcaacctggtcggggcgcgcatcgtcgaggacgacgacgagttgtacgccatcacctcg
agcggcggtgtcatccgcactgcggcgaagcaggtgcgcaaggcaggccgtcagaccaag
ggcgtgcggctcatgaacctggccgagggcgatacattgctcgcgatcgcgcgcaacgcc
gacgagccggacgaagccgacgcagccggagctaaggagtcgtaa
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