Rhodococcus pyridinivorans SB3094: Y013_17460
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Entry
Y013_17460 CDS
T02974
Name
(GenBank) polyketide synthase
KO
K12437
polyketide synthase 13
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00074
Mycolic acid biosynthesis
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
Module
rpy_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
Y013_17460
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpy01004
]
Y013_17460
Lipid biosynthesis proteins [BR:
rpy01004
]
Polyketide synthase
Modular PKS
Y013_17460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
DUF7080
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
Abhydrolase_6
YjeF_N
Abhydrolase_3
Motif
Other DBs
NCBI-ProteinID:
AHD22301
UniProt:
V9XFT1
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All DBs
Position
3734107..3739059
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AA seq
1650 aa
AA seq
DB search
MTVAQLREWLRNWIADATGQPVSQISDDRPMEEFGLSSRDAVAMAGEIEELLGVTLNATI
AYQHPTIASLATRIIEGEPEAPAEDDSALYTVGAAAGSKDVAIVGLSTRLPGHVDTPEQM
WELLASGRDGISDLPEGRWSEFENDPAVWESIRNANTRGGYLDDVKGFDAEFFAMSPREV
EMVDPQQRLALELTWEALEHAHIPPSDLKGGSVGVFIGSSASDYMLLAVGDPSAAHPYAL
TGTSTAVIANRVSYFYDFHGPSVTLDTACSSSLVAVHQAVRALRNGEADVALAGGVNMLL
APAGTLGFDELGVMAPDGRIKAFSADADGMIRAEGGGLVVLKRLEDAERDGDDILAVIAG
SAVNQDGRSNGLAAPNPEAQVDVLRRAYRDAQILPSGVDYIEAHGTGTVLGDPIEADALG
RVVGRGREDDKPVLLGSAKTNFGHLESAAGAAGLIKVVLAMQNDQLPPTLNYTAPNPYIP
FDSAHLKVIPEGAKWPRYTGRAVAGVSGFGFGGTNAHVVVREYTGPEGLEASEAEVEVLP
EEIPAAETTEQARELPVLLAVSAAMPSRRRRAAADLADWLETEKGSTTPLADVARTLARR
NHGRSRAIVVASNHGEAIAGLRAVAAGKPAQGVFTADAPASKGAVWVLSGFGAQHRKMAK
QLYLENPVFAAAVDEVDELIYDESGYSMKEKFLDDAQDYDVETAQVGIFTIQIGLAALLR
HHGAEPAAVVGHSMGEAAGAYISGGLSLEDAVRVICSRSRLMGEAESGLTGDDIRLMALV
EYSAAEITDVLPDFPQLEVCVYAAPTHTVIGGPQEQVNAIVTRAEAEEKFARVLQTKGAS
HTSQVDPILGELAAELAGIEPHRLKVDLYSSVDQETLYRAGHDGIHDVEYWTKGMRHSVY
FTQAIRQALSDGHTTFVELNANPATLMSVAATAFDAGVQDGQFIQTLKRKEDESLGVLTA
LAQLYVHGQSVDLRTLLPEGDYADLPRTAFLRKPYWVDASIGTSGNGRAPGARVALPDGR
YVWEVQASAVTDAAELVVAAASQVLSDVTLTASIPHTDVPATGTLTTTLTRHPGGASLQV
HANTGDGFTLVHEGVVTSGEPLPAPVAVAAKPAAQAEELPEVVESFGDQWDPNGSQSLDD
RLTLIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKNRVEYEFDIPQLQLSAVKDASLR
DVAKYLRYAVEHREEVAQLAEQQAAEKAAERAAAAEQDDLPEVEDTTAVGEAEQILAEAE
AEAEAEAEAEAEAEAEAQTAPETAEPEQESSGVDVPPRDAAERLTFASWAVVTGKSAKGI
FNPLPKLDRDVAEKLAARLTERAEGEITVDDVLSAPTVEQLAETVRQHLESADRIDGLVR
TLRPRAEGSDTVPVFVFHPAGGSTVAYEPLLRRLPAHTPVFGFERTEGPIDTRAQAYLPL
IKEIQGDGPYVLCGWSLGGVLAYAVARLLREEGKDVRLVGLIDTVMAGEKVEDTPDEIRK
RWQRYSAFAKKTYGVDAPLPYDLLAEAGSDEEQIGILMGLLELSGAQIPGGIIEHQRTSW
LDNRAIQTAELLPYDGKVVLYMADKYHDDAIDLEPAFGTRQPDGGWGEVVADLEVVHVGG
DHLQIVDEPYISKVGEDLTRKLADIEASRS
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgcgcagctgcgcgaatggctgcgcaactggatcgccgacgcgaccgggcag
ccggtctcccagatctcggacgatcgtccgatggaagagttcgggctgtcctcccgggac
gccgtcgccatggcgggtgagatcgaggaactcctcggtgtcaccctcaacgcgacgatc
gcctaccagcacccgacgatcgcgtcgctcgcgacgcgcatcatcgaaggtgagcccgag
gcacccgccgaggacgactccgccctgtacacggtcggtgccgcggcgggttcgaaggac
gtcgccatcgtcggtctgtccacccgtttgccgggccacgtcgacacccccgaacagatg
tgggagctgctcgcgtccggacgcgacggcatctccgatctgcccgagggccgctggtcg
gagttcgagaacgatcccgccgtgtgggagtcgatccgcaacgccaacaccaggggcggc
tacctcgacgacgtcaagggcttcgacgccgagttcttcgcgatgtcgccgcgcgaggtc
gagatggtcgacccgcaacagcgcctcgcgctggagctgacctgggaagcactcgagcac
gcgcacatcccgccgagcgacctcaagggcggctcggtcggtgtgttcatcggcagctcg
gcgagcgactacatgctcctcgcggtcggcgatccgtccgcagcgcatccctacgcgctc
accggcacctccaccgcggtcatcgcgaaccgcgtgtcgtacttctacgacttccacggc
ccgtccgtcacgctcgacacggcgtgctcgtcgtcgctggtcgccgtgcaccaggccgta
cgtgcgctgcgtaacggcgaagccgacgtcgccctcgccggtggcgtcaacatgctgctc
gccccggccggcaccctcggcttcgacgaactcggcgtcatggcacccgacggccgcatc
aaggcgttctccgccgacgccgacggcatgatccgcgccgagggcgggggtctcgtcgtg
ctcaagcgtctcgaggacgccgagcgcgacggcgacgacatcctcgcggtgatcgccggt
tcggccgtcaaccaggacggccgctccaacggcctggccgctcccaaccccgaagcgcag
gtcgacgtgctgcgccgcgcctaccgcgacgcgcagatcctgccgtccggtgtcgactac
atcgaggcgcacggcaccggcacggtgctcggcgacccgatcgaggccgacgcgctcggc
cgcgtcgtcggtcgtggccgcgaggacgacaagccggtcctgctcggttcggccaagacc
aacttcggtcacctcgagtccgccgcgggtgcggccggtctcatcaaggtcgttctcgcg
atgcagaacgatcagctgcccccgacgctcaactacaccgcgcccaacccgtacatcccg
ttcgacagcgcgcacctgaaggtcatccccgagggcgcgaagtggccgcgctacaccggt
cgcgccgtcgccggtgtatccggcttcggtttcggtggcacgaacgcgcacgtcgtcgtg
cgcgagtacaccggccccgaggggctcgaagcgtccgaggccgaggtcgaggtcctgccg
gaggagatccccgccgcggagaccaccgagcaggcccgcgagctgcccgtcctgctcgcc
gtctccgctgcgatgccgtcgcgtcgccgccgtgccgccgccgatctcgccgactggctc
gagaccgagaagggcagcacgacgccgctcgccgacgtcgcccgcacgctcgctcgtcgc
aaccacggccggtcccgcgcgatcgtcgtggcgagcaaccacggtgaggcgatcgccggt
ctgcgtgccgtcgccgccggcaagcccgcgcagggcgtgttcaccgccgacgctcccgcc
tccaagggcgcggtgtgggtgctctccggcttcggtgcccagcaccgcaaaatggccaag
cagctgtacctggagaaccctgtcttcgcggcggccgtcgacgaggtcgacgagctgatc
tacgacgagtcgggctactccatgaaggagaagttcctcgacgacgcgcaggactacgac
gtcgagacggcgcaagtcggcatcttcacgatccagatcggtctcgccgcgctgctgcgc
caccacggtgccgagcccgccgcggtcgtcggccactcgatgggtgaggccgccggcgcc
tacatctcgggcggactctcgctcgaggacgccgtgcgcgtcatctgctcgcgttcgcgt
ctgatgggtgaggccgaatccggcctgaccggcgacgacatccgcctcatggcgctcgtc
gagtacagcgccgccgagatcaccgacgtgctgcccgacttcccgcagctcgaggtctgc
gtctacgcggcgccgacgcacaccgtcatcggtggcccgcaggagcaggtcaacgcgatc
gtcacgcgtgccgaggccgaggagaaattcgcccgggtcctgcagaccaagggcgcgagc
cacacctcgcaggtcgatccgatcctcggcgagctcgcagccgagctcgccggcatcgaa
ccgcaccgcctgaaggtcgacctgtactcgtcggtcgaccaggagaccctctaccgtgca
ggtcacgacggcatccacgacgtcgagtactggaccaagggcatgcgccacagcgtgtac
ttcacgcaggcgatccggcaggcgctgtccgacgggcacaccaccttcgtcgagctcaac
gccaaccccgcgacgctcatgtcggtcgcggcgacggccttcgacgccggtgtgcaggac
ggccagttcatccagacgctcaagcgcaaggaggacgagtccctcggtgtgctgaccgcg
ctcgcgcagttgtacgtgcacgggcagtccgtcgatctgaggacgctgctgccggaaggc
gactacgccgacctgccgcgcaccgccttcctgcgcaagccgtactgggtcgacgccagc
atcggcacctccggcaacggccgcgcgcccggcgcccgggtcgcactgcccgacggccgc
tacgtgtgggaggtgcaagcatccgccgtcaccgatgcggccgagctggtcgtcgcggcg
gcctcgcaggtgctgtccgatgtcacgctcaccgcgtccatcccgcacaccgacgtcccc
gcgaccggcaccctcaccacgacgctcacccggcacccgggtggcgcgtcactgcaggtg
cacgcgaacaccggcgacggtttcacgctcgtccacgagggtgtcgtcacctccggtgag
ccgctgcccgcgcccgtcgcggtggccgcgaagccggccgcgcaggccgaggagcttccc
gaggtcgtcgagtcgttcggcgaccagtgggatcccaacggatcgcagagcctcgacgac
cgcctgacgctgatcgtcgccgagtccatgggttatgcgcccgaggatctgcccgccgag
atcccgctcatcgagctgggcctcgactcgctcatggcggtccgcatcaagaaccgcgtc
gagtacgagttcgacatcccgcagctgcagctgtcggcggtcaaggacgcgagcctgcgc
gacgtcgcgaagtacctgcgatacgccgtcgagcaccgcgaggaggtcgcgcagctcgcc
gagcagcaggccgccgagaaggcagccgaacgcgccgccgctgcggagcaggacgatctt
cccgaggtcgaggacaccaccgcggtgggcgaggccgagcagattctcgccgaagccgaa
gccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcacagaccgcg
cccgagacggccgagcccgagcaggagtcgagcggtgtcgacgtgccgccgcgcgacgcc
gcggaacggttgaccttcgcctcgtgggccgtggtcacgggcaagtcggccaagggcatc
ttcaacccgttgccgaagctcgaccgcgatgtcgccgagaagctcgcggcacggctgacc
gagcgggccgagggtgagatcaccgtcgacgacgtgctctccgccccgaccgtcgagcag
ctcgccgagaccgtccgtcagcatctcgaatccgccgatcgcatcgacggactcgtgcgc
accctgcggccccgcgccgagggatcggacaccgtgccggtcttcgtcttccaccccgcg
ggtggttcgacggtcgcgtacgagccgctgctgcgccgcctgcccgcgcacaccccggtg
ttcggtttcgagcgcaccgagggcccgatcgacacccgcgcacaggcgtacctgccgctc
atcaaggagatccagggcgacggcccgtacgtgctgtgcggctggtcgctcggcggtgtc
ctggcctacgcggtggcccgtctgctccgcgaggagggcaaggacgtgcgtctcgtcggt
ctcatcgacaccgtcatggccggtgagaaggtcgaggacacgcccgacgagatccgcaag
cgctggcagcgttactcggcgttcgcgaagaagacctacggggtcgacgcgccgctgccc
tacgacctgctggccgaggccggcagcgacgaggagcagatcggcatcctgatgggtctg
ctcgagctgagcggggcgcagatccccggcggcatcatcgagcaccagcgcacgtcgtgg
ctcgacaaccgcgccatccagaccgcggagctgctgccctacgacggcaaggtcgtgctg
tacatggccgacaagtatcacgacgacgcgatcgatctcgagccggctttcgggacccgg
cagcccgacggtgggtggggtgaggtcgtcgcggatctcgaggtcgtgcacgtcggcggc
gatcacctgcagatcgtcgacgagccgtacatctcgaaggtgggggaagacctgacccgc
aagctggccgacatcgaggcctcgaggagctga
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