KEGG   Rhodococcus pyridinivorans SB3094: Y013_17460
Entry
Y013_17460        CDS       T02974                                 
Name
(GenBank) polyketide synthase
  KO
K12437  polyketide synthase 13
Organism
rpy  Rhodococcus pyridinivorans SB3094
Pathway
rpy00074  Mycolic acid biosynthesis
rpy01100  Metabolic pathways
rpy01110  Biosynthesis of secondary metabolites
Module
rpy_M00887  Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:rpy00001]
 09100 Metabolism
  09103 Lipid metabolism
   00074 Mycolic acid biosynthesis
    Y013_17460
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rpy01004]
    Y013_17460
Lipid biosynthesis proteins [BR:rpy01004]
 Polyketide synthase
  Modular PKS
   Y013_17460
SSDB
Motif
Pfam: ketoacyl-synt Acyl_transf_1 Ketoacyl-synt_C PP-binding Thioesterase KAsynt_C_assoc DUF7080 Thiolase_N RhiE-like_linker CurL-like_PKS_C Abhydrolase_6 YjeF_N Abhydrolase_3
Other DBs
NCBI-ProteinID: AHD22301
UniProt: V9XFT1
LinkDB
Position
3734107..3739059
AA seq 1650 aa
MTVAQLREWLRNWIADATGQPVSQISDDRPMEEFGLSSRDAVAMAGEIEELLGVTLNATI
AYQHPTIASLATRIIEGEPEAPAEDDSALYTVGAAAGSKDVAIVGLSTRLPGHVDTPEQM
WELLASGRDGISDLPEGRWSEFENDPAVWESIRNANTRGGYLDDVKGFDAEFFAMSPREV
EMVDPQQRLALELTWEALEHAHIPPSDLKGGSVGVFIGSSASDYMLLAVGDPSAAHPYAL
TGTSTAVIANRVSYFYDFHGPSVTLDTACSSSLVAVHQAVRALRNGEADVALAGGVNMLL
APAGTLGFDELGVMAPDGRIKAFSADADGMIRAEGGGLVVLKRLEDAERDGDDILAVIAG
SAVNQDGRSNGLAAPNPEAQVDVLRRAYRDAQILPSGVDYIEAHGTGTVLGDPIEADALG
RVVGRGREDDKPVLLGSAKTNFGHLESAAGAAGLIKVVLAMQNDQLPPTLNYTAPNPYIP
FDSAHLKVIPEGAKWPRYTGRAVAGVSGFGFGGTNAHVVVREYTGPEGLEASEAEVEVLP
EEIPAAETTEQARELPVLLAVSAAMPSRRRRAAADLADWLETEKGSTTPLADVARTLARR
NHGRSRAIVVASNHGEAIAGLRAVAAGKPAQGVFTADAPASKGAVWVLSGFGAQHRKMAK
QLYLENPVFAAAVDEVDELIYDESGYSMKEKFLDDAQDYDVETAQVGIFTIQIGLAALLR
HHGAEPAAVVGHSMGEAAGAYISGGLSLEDAVRVICSRSRLMGEAESGLTGDDIRLMALV
EYSAAEITDVLPDFPQLEVCVYAAPTHTVIGGPQEQVNAIVTRAEAEEKFARVLQTKGAS
HTSQVDPILGELAAELAGIEPHRLKVDLYSSVDQETLYRAGHDGIHDVEYWTKGMRHSVY
FTQAIRQALSDGHTTFVELNANPATLMSVAATAFDAGVQDGQFIQTLKRKEDESLGVLTA
LAQLYVHGQSVDLRTLLPEGDYADLPRTAFLRKPYWVDASIGTSGNGRAPGARVALPDGR
YVWEVQASAVTDAAELVVAAASQVLSDVTLTASIPHTDVPATGTLTTTLTRHPGGASLQV
HANTGDGFTLVHEGVVTSGEPLPAPVAVAAKPAAQAEELPEVVESFGDQWDPNGSQSLDD
RLTLIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKNRVEYEFDIPQLQLSAVKDASLR
DVAKYLRYAVEHREEVAQLAEQQAAEKAAERAAAAEQDDLPEVEDTTAVGEAEQILAEAE
AEAEAEAEAEAEAEAEAQTAPETAEPEQESSGVDVPPRDAAERLTFASWAVVTGKSAKGI
FNPLPKLDRDVAEKLAARLTERAEGEITVDDVLSAPTVEQLAETVRQHLESADRIDGLVR
TLRPRAEGSDTVPVFVFHPAGGSTVAYEPLLRRLPAHTPVFGFERTEGPIDTRAQAYLPL
IKEIQGDGPYVLCGWSLGGVLAYAVARLLREEGKDVRLVGLIDTVMAGEKVEDTPDEIRK
RWQRYSAFAKKTYGVDAPLPYDLLAEAGSDEEQIGILMGLLELSGAQIPGGIIEHQRTSW
LDNRAIQTAELLPYDGKVVLYMADKYHDDAIDLEPAFGTRQPDGGWGEVVADLEVVHVGG
DHLQIVDEPYISKVGEDLTRKLADIEASRS
NT seq 4953 nt   +upstreamnt  +downstreamnt
atgacggttgcgcagctgcgcgaatggctgcgcaactggatcgccgacgcgaccgggcag
ccggtctcccagatctcggacgatcgtccgatggaagagttcgggctgtcctcccgggac
gccgtcgccatggcgggtgagatcgaggaactcctcggtgtcaccctcaacgcgacgatc
gcctaccagcacccgacgatcgcgtcgctcgcgacgcgcatcatcgaaggtgagcccgag
gcacccgccgaggacgactccgccctgtacacggtcggtgccgcggcgggttcgaaggac
gtcgccatcgtcggtctgtccacccgtttgccgggccacgtcgacacccccgaacagatg
tgggagctgctcgcgtccggacgcgacggcatctccgatctgcccgagggccgctggtcg
gagttcgagaacgatcccgccgtgtgggagtcgatccgcaacgccaacaccaggggcggc
tacctcgacgacgtcaagggcttcgacgccgagttcttcgcgatgtcgccgcgcgaggtc
gagatggtcgacccgcaacagcgcctcgcgctggagctgacctgggaagcactcgagcac
gcgcacatcccgccgagcgacctcaagggcggctcggtcggtgtgttcatcggcagctcg
gcgagcgactacatgctcctcgcggtcggcgatccgtccgcagcgcatccctacgcgctc
accggcacctccaccgcggtcatcgcgaaccgcgtgtcgtacttctacgacttccacggc
ccgtccgtcacgctcgacacggcgtgctcgtcgtcgctggtcgccgtgcaccaggccgta
cgtgcgctgcgtaacggcgaagccgacgtcgccctcgccggtggcgtcaacatgctgctc
gccccggccggcaccctcggcttcgacgaactcggcgtcatggcacccgacggccgcatc
aaggcgttctccgccgacgccgacggcatgatccgcgccgagggcgggggtctcgtcgtg
ctcaagcgtctcgaggacgccgagcgcgacggcgacgacatcctcgcggtgatcgccggt
tcggccgtcaaccaggacggccgctccaacggcctggccgctcccaaccccgaagcgcag
gtcgacgtgctgcgccgcgcctaccgcgacgcgcagatcctgccgtccggtgtcgactac
atcgaggcgcacggcaccggcacggtgctcggcgacccgatcgaggccgacgcgctcggc
cgcgtcgtcggtcgtggccgcgaggacgacaagccggtcctgctcggttcggccaagacc
aacttcggtcacctcgagtccgccgcgggtgcggccggtctcatcaaggtcgttctcgcg
atgcagaacgatcagctgcccccgacgctcaactacaccgcgcccaacccgtacatcccg
ttcgacagcgcgcacctgaaggtcatccccgagggcgcgaagtggccgcgctacaccggt
cgcgccgtcgccggtgtatccggcttcggtttcggtggcacgaacgcgcacgtcgtcgtg
cgcgagtacaccggccccgaggggctcgaagcgtccgaggccgaggtcgaggtcctgccg
gaggagatccccgccgcggagaccaccgagcaggcccgcgagctgcccgtcctgctcgcc
gtctccgctgcgatgccgtcgcgtcgccgccgtgccgccgccgatctcgccgactggctc
gagaccgagaagggcagcacgacgccgctcgccgacgtcgcccgcacgctcgctcgtcgc
aaccacggccggtcccgcgcgatcgtcgtggcgagcaaccacggtgaggcgatcgccggt
ctgcgtgccgtcgccgccggcaagcccgcgcagggcgtgttcaccgccgacgctcccgcc
tccaagggcgcggtgtgggtgctctccggcttcggtgcccagcaccgcaaaatggccaag
cagctgtacctggagaaccctgtcttcgcggcggccgtcgacgaggtcgacgagctgatc
tacgacgagtcgggctactccatgaaggagaagttcctcgacgacgcgcaggactacgac
gtcgagacggcgcaagtcggcatcttcacgatccagatcggtctcgccgcgctgctgcgc
caccacggtgccgagcccgccgcggtcgtcggccactcgatgggtgaggccgccggcgcc
tacatctcgggcggactctcgctcgaggacgccgtgcgcgtcatctgctcgcgttcgcgt
ctgatgggtgaggccgaatccggcctgaccggcgacgacatccgcctcatggcgctcgtc
gagtacagcgccgccgagatcaccgacgtgctgcccgacttcccgcagctcgaggtctgc
gtctacgcggcgccgacgcacaccgtcatcggtggcccgcaggagcaggtcaacgcgatc
gtcacgcgtgccgaggccgaggagaaattcgcccgggtcctgcagaccaagggcgcgagc
cacacctcgcaggtcgatccgatcctcggcgagctcgcagccgagctcgccggcatcgaa
ccgcaccgcctgaaggtcgacctgtactcgtcggtcgaccaggagaccctctaccgtgca
ggtcacgacggcatccacgacgtcgagtactggaccaagggcatgcgccacagcgtgtac
ttcacgcaggcgatccggcaggcgctgtccgacgggcacaccaccttcgtcgagctcaac
gccaaccccgcgacgctcatgtcggtcgcggcgacggccttcgacgccggtgtgcaggac
ggccagttcatccagacgctcaagcgcaaggaggacgagtccctcggtgtgctgaccgcg
ctcgcgcagttgtacgtgcacgggcagtccgtcgatctgaggacgctgctgccggaaggc
gactacgccgacctgccgcgcaccgccttcctgcgcaagccgtactgggtcgacgccagc
atcggcacctccggcaacggccgcgcgcccggcgcccgggtcgcactgcccgacggccgc
tacgtgtgggaggtgcaagcatccgccgtcaccgatgcggccgagctggtcgtcgcggcg
gcctcgcaggtgctgtccgatgtcacgctcaccgcgtccatcccgcacaccgacgtcccc
gcgaccggcaccctcaccacgacgctcacccggcacccgggtggcgcgtcactgcaggtg
cacgcgaacaccggcgacggtttcacgctcgtccacgagggtgtcgtcacctccggtgag
ccgctgcccgcgcccgtcgcggtggccgcgaagccggccgcgcaggccgaggagcttccc
gaggtcgtcgagtcgttcggcgaccagtgggatcccaacggatcgcagagcctcgacgac
cgcctgacgctgatcgtcgccgagtccatgggttatgcgcccgaggatctgcccgccgag
atcccgctcatcgagctgggcctcgactcgctcatggcggtccgcatcaagaaccgcgtc
gagtacgagttcgacatcccgcagctgcagctgtcggcggtcaaggacgcgagcctgcgc
gacgtcgcgaagtacctgcgatacgccgtcgagcaccgcgaggaggtcgcgcagctcgcc
gagcagcaggccgccgagaaggcagccgaacgcgccgccgctgcggagcaggacgatctt
cccgaggtcgaggacaccaccgcggtgggcgaggccgagcagattctcgccgaagccgaa
gccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcacagaccgcg
cccgagacggccgagcccgagcaggagtcgagcggtgtcgacgtgccgccgcgcgacgcc
gcggaacggttgaccttcgcctcgtgggccgtggtcacgggcaagtcggccaagggcatc
ttcaacccgttgccgaagctcgaccgcgatgtcgccgagaagctcgcggcacggctgacc
gagcgggccgagggtgagatcaccgtcgacgacgtgctctccgccccgaccgtcgagcag
ctcgccgagaccgtccgtcagcatctcgaatccgccgatcgcatcgacggactcgtgcgc
accctgcggccccgcgccgagggatcggacaccgtgccggtcttcgtcttccaccccgcg
ggtggttcgacggtcgcgtacgagccgctgctgcgccgcctgcccgcgcacaccccggtg
ttcggtttcgagcgcaccgagggcccgatcgacacccgcgcacaggcgtacctgccgctc
atcaaggagatccagggcgacggcccgtacgtgctgtgcggctggtcgctcggcggtgtc
ctggcctacgcggtggcccgtctgctccgcgaggagggcaaggacgtgcgtctcgtcggt
ctcatcgacaccgtcatggccggtgagaaggtcgaggacacgcccgacgagatccgcaag
cgctggcagcgttactcggcgttcgcgaagaagacctacggggtcgacgcgccgctgccc
tacgacctgctggccgaggccggcagcgacgaggagcagatcggcatcctgatgggtctg
ctcgagctgagcggggcgcagatccccggcggcatcatcgagcaccagcgcacgtcgtgg
ctcgacaaccgcgccatccagaccgcggagctgctgccctacgacggcaaggtcgtgctg
tacatggccgacaagtatcacgacgacgcgatcgatctcgagccggctttcgggacccgg
cagcccgacggtgggtggggtgaggtcgtcgcggatctcgaggtcgtgcacgtcggcggc
gatcacctgcagatcgtcgacgagccgtacatctcgaaggtgggggaagacctgacccgc
aagctggccgacatcgaggcctcgaggagctga

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