Rhodococcus pyridinivorans SB3094: Y013_18580
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Entry
Y013_18580 CDS
T02974
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy03030
DNA replication
rpy03430
Mismatch repair
rpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Y013_18580
03430 Mismatch repair
Y013_18580
03440 Homologous recombination
Y013_18580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpy03032
]
Y013_18580
03400 DNA repair and recombination proteins [BR:
rpy03400
]
Y013_18580
Enzymes [BR:
rpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Y013_18580
DNA replication proteins [BR:
rpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Y013_18580
DNA repair and recombination proteins [BR:
rpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Y013_18580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
DNApol3-delta_C
RuvB_N
Mg_chelatase
AAA_5
AAA_16
DUF2914
Motif
Other DBs
NCBI-ProteinID:
AHD22490
UniProt:
V9XKH9
LinkDB
All DBs
Position
3972253..3973440
Genome browser
AA seq
395 aa
AA seq
DB search
MPGVFDRLVGQRDVETELVAAAVAARRGDTGSAMTHSWLFTGPPGSGRSVAALCFAAALQ
CTDEETSGCGRCHACTTTMAGTHGDVRRVVPEGLTISVKSMRDIVQVASRRPSTGRWQVV
VIEDADRLTEGAANALLKVVEEPPQRTVFLLCAPSVDPEDISVTLRSRCRHIGLVTPSAD
AIARVLEATDRIDPKTAQWAASVSAGHVGRARRLATDEGARDNRARALAVAGAVLRPATT
YSAADDLGRSAETEAKEISAERDERETEELKTALGAGGTGKGAAGALRGSAGVLKELERT
QKSRKTRTERDIMDRALIDLAGLYRDALVHAFGSRVTLNHPDMSDRAADLAARTRPESLL
ECIEAILDCREALAQNVKPRFALATLAARLSSAFR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcccggggtcttcgatcgtctcgtcggtcaacgcgatgtcgagaccgaactcgtcgcg
gccgcggtagctgcccgtcggggcgacaccgggtcggcgatgacgcactcgtggctgttc
accggtcctcccgggtccggtcgctcggtcgcggcgctgtgtttcgccgccgccctgcag
tgcaccgacgaggaaacttccggctgcgggcgatgccacgcctgcaccaccacgatggcc
ggcacccacggcgacgtacggcgggtcgtgcccgagggactgacgatcagcgtcaagtcg
atgcgcgacatcgtgcaggtcgcgtcgcggcgtcccagcacgggccgatggcaggtcgtg
gtgatcgaggacgccgaccgtctcaccgaaggcgccgcgaacgcgctgctgaaggtggtc
gaggaacctccgcagcgaacggtcttcctcctgtgtgcgccgtcggtcgatccagaggac
atctcggtgacgctgcgctcgcgctgccgtcacatcgggttggtcactcccagcgccgac
gccatcgcgcgcgtcctcgaggccaccgaccgcatcgatccgaagacggcgcagtgggcc
gcatccgtcagcgcaggccacgtcggccgggcccgacggttggccaccgacgagggcgcc
cgcgacaaccgggcacgtgccctcgctgtcgccggcgcggtcctgcgccccgccaccacc
tactccgcagccgacgacctcggccgcagcgccgagaccgaggcaaaggagatcagtgcg
gagcgcgacgagcgcgagaccgaagagctgaagaccgcgctcggtgccggcggtaccggc
aagggtgccgcgggtgcgcttcgcggttcggccggggtcctcaaggaactcgaacgcact
cagaagtcgcggaagacgcgaaccgagcgcgacatcatggaccgagccctgatcgatctc
gccggtctctaccgggacgcactggtgcacgccttcggatcgcgggtcacgctcaaccat
ccggacatgtcggatcgtgcggccgacctcgcggcgaggacccggccggagtcgctgctc
gagtgcatcgaagccatcctcgactgccgggaggcgctcgcccagaacgtcaaaccccgc
ttcgctctcgcgacgcttgcagcccggttgagctcggcgttccggtag
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