Rhodococcus pyridinivorans SB3094: Y013_20270
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Entry
Y013_20270 CDS
T02974
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpy03019
]
Y013_20270
Enzymes [BR:
rpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Y013_20270
Messenger RNA biogenesis [BR:
rpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Y013_20270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
DSHCT
ResIII
Helicase_C
MTR4-like_stalk
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHD22798
UniProt:
V9XKB1
LinkDB
All DBs
Position
complement(4321538..4323838)
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AA seq
766 aa
AA seq
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MRTQDRSQLSLFATELDFPLDDFQVEACRALEYDRDVLVCAPTGAGKTVVGEFAARLALA
AGGRCFYTTPIKALSNQKYLDLSRRFGDDRVGLLTGDISLDPHAPVVVMTTEVLRSMLHG
GSPLLHGLTHVVMDEVHYLADRERGAVWEEAILSLPDDVRLTSLSATVSNAEEFGGWLRG
VRGDLAVVVEETRPVPLTQHMLAGGRLFDLLSPSGTVDETLERYIAHRQLVEAAPGPATG
RGRRRRRARGAPGPAGADLPEVVARLEAEQLLPAILFRFSRNGCDDAVAECLESSVRLTE
AADVAEIRAVADRHTAALPPADLDAVGHTEWLEGLERGFAAHHAGLIPAFRHTVEELFAR
GLVRVVFATETLAVGVNMPARTVVLERLVKPTADGPVRLSPGEYTQLTGRAGRRGIDVEG
HAVVLWSPEAAPATVAGLAGARSYPLHSSLRVGYNTAVNLVAGRGIPGSRDFLRRSFAQF
QAERSVAALTDAVRANTTALRDLDTELGDVEGFTEYRHLCDRLAEARRSGSAELVTSLAR
AVRSHPAHRRGDRERLLALSARRAAVHGDTERMRSQIDTVTGRLVETFDRTLDLLEERGY
LLRDPMGGSAYVTDDGRRLGRIYCANDLLVAECVRTGAWSGLTPAELAAVASSALGETRR
RTVGVPGRTTPAIDEALRATSRLWSELAGREERLGLEVGPDPDPIAVAAIHRWARGDGLA
AALRTASDAGLSAGDLVRRYLRTLDLVDQTGLCRRDDLPPVSFTLT
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcacgcaggaccggtcgcagctctcgctgttcgcgaccgaactcgatttccccctc
gacgacttccaggtcgaggcctgccgcgccctcgagtacgaccgcgacgtgctggtgtgc
gcccccaccggggcgggcaagaccgtcgtcggtgaattcgccgcccgtctcgcgctcgca
gcgggcggacgctgcttctacaccacccccatcaaggcgctgagcaaccagaagtatctc
gacctgtcgcgccggttcggcgacgaccgtgtcggactgctcaccggcgacatctcgctg
gacccccatgcgcccgtggtcgtcatgaccaccgaagtgctgcgcagcatgctgcacggc
ggctccccgctcctgcacggactcacccacgtcgtcatggacgaggtgcactatctcgcc
gaccgcgaacgcggcgcggtatgggaggaagcgatcctctcgctccccgacgacgtgcga
ctgaccagcctgtcggccacggtcagcaacgccgaggagttcggcggctggctgcgcggc
gtccgcggcgacctcgcggtcgtcgtcgaggagacccggcccgtcccgctcacccagcac
atgctcgccggcggtcggctgttcgacctgctgtccccgtccggcaccgtcgacgagacc
ctcgagcggtacatcgcccaccgtcagctcgtcgaggccgcgcccggccccgcgaccggc
cgtggacgacgacggcgacgcgcgcgcggagcacccggaccggccggtgccgacctgccc
gaggtcgtcgcccggctcgaggccgaacaactgttgccggccatcttgttccggttcagc
cgcaacggctgcgacgacgccgtcgccgaatgcctcgaatcgtcggtccgtctcaccgag
gcggccgacgtcgccgagatccgcgcggtcgccgaccggcacaccgccgccctgccgccc
gccgatctcgacgccgtcggtcacacagagtggctcgaaggactcgaacgcggtttcgcc
gcacaccacgccggtctgatcccggccttccgtcacaccgtcgaggagttgttcgcccgc
ggtctcgtgcgggtcgtgttcgccaccgagaccctcgccgtgggcgtgaacatgccggcg
cgcaccgtcgtcctcgaacgcctcgtcaaacccaccgccgacggaccggtgcgcctctcc
cccggcgagtacacccagctcaccggtcgtgccggtcggcgcggcatcgatgtcgaaggc
cacgcggtcgtgctgtggagtcccgaggccgcccccgcgaccgtcgccggtctcgccggc
gcacgctcgtacccgctccacagttcgctgcgcgtcggctacaacaccgcggtcaacctg
gtcgccggtcgcggcatccccggctcacgggacttcctgcgacgttcgttcgcccagttc
caggccgaacgatccgtcgcagcgctcaccgacgccgtccgcgccaacacgacggcgctg
cgcgatctcgacaccgaactcggggacgtcgagggcttcaccgagtaccggcacctgtgc
gaccggctcgccgaggcacgacgctccggttcggccgagctcgtgacgtcgctggcacgg
gcggtgcggtcgcatcccgcgcatcgacgcggcgacagggagcgcctcctcgccctctcg
gcgcgacgcgccgcggtgcacggcgacaccgaacggatgcggtcgcagatcgacacggtc
accggccgcctcgtcgagaccttcgatcgcacgctggatctgctcgaggagcggggttat
ctgctccgcgacccgatgggcgggtcggcctacgtcaccgacgacggtcgtcgcctgggc
cggatctactgcgcgaacgaccttctcgtcgccgaatgcgtgcggacgggcgcgtggtcg
ggactgacgccggccgaactcgccgccgtcgcctcgagcgctctgggcgagacccgacgc
cgcaccgtcggagtcccgggacgcaccaccccggcgatcgacgaggcgctgcgcgccacc
tcacggctgtggagcgaactcgccggacgcgaagaacgtctcggcctcgaagtggggccg
gatccggatccgatcgccgtcgccgcgatccaccgctgggcacgcggggacggactcgcc
gccgccctgcgcaccgcatcggatgcggggctctcggcaggcgatctggtccgtcgctat
ctgcgcaccctcgacctcgtggatcagaccggactgtgccggcgcgacgatctgccgccg
gtctcgttcaccctgacctga
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