Rhodococcus pyridinivorans SB3094: Y013_21870
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Entry
Y013_21870 CDS
T02974
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00260
Glycine, serine and threonine metabolism
rpy00460
Cyanoamino acid metabolism
rpy00630
Glyoxylate and dicarboxylate metabolism
rpy00670
One carbon pool by folate
rpy00680
Methane metabolism
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
rpy01120
Microbial metabolism in diverse environments
rpy01200
Carbon metabolism
rpy01230
Biosynthesis of amino acids
rpy01240
Biosynthesis of cofactors
rpy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Y013_21870
09102 Energy metabolism
00680 Methane metabolism
Y013_21870
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Y013_21870
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Y013_21870
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Y013_21870
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Y013_21870
Enzymes [BR:
rpy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Y013_21870
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
eCIS_core
SelA
Motif
Other DBs
NCBI-ProteinID:
AHD23085
UniProt:
V9XM78
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All DBs
Position
4639265..4640560
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AA seq
431 aa
AA seq
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MTAAPGADVNTAALNDLDPEVAEAMAGELSRQRDTLEMIASENFVPRAVLQAQGSVLTNK
YAEGYPGRRYYGGCENVDIVEDLARNRAKELFGADFANVQPHSGAQANAAVLMALMTPGE
KLLGLDLAHGGHLTHGMKLNFSGKLYDVASYGVSKDDHRIDMDEVRDIALREKPKVIVAG
WSAYPRHEDFAAFRSIADEVGAYLWVDMAHFAGLVAAGLHPSPVPYADVVSTTVHKTLGG
PRSGLILAKQEWAKKINSAVFPGQQGGPLMHAIAAKAVALKIAASDEFKDRQRRTLSGAR
IIADRLSQSDVADKGISVLTGGTDVHLVLVDLRNSQLDGQQGEDALHEVGITVNRNAVPF
DPRPPMVTSGLRIGTPALATRGFGDEQFTEVAEIIAQTLVGGADAESLRTRVSALAQSVP
LYEGLEDWRLI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcgcccggcgccgacgtgaacactgccgcactgaacgacctcgatcccgag
gtcgccgaggccatggccggcgagctgtcgcgtcagcgcgacacgctcgagatgatcgcg
tcggagaacttcgtgccgcgcgccgtcctccaggcccagggcagcgtcctgaccaacaag
tacgccgagggttaccccggccgccgctactacggcggctgcgagaacgtcgacatcgtc
gaggacctcgcccgtaaccgcgccaaggagctcttcggcgccgatttcgcgaacgtgcag
ccgcactcgggtgcgcaggcgaacgcggcggtgctcatggcgctgatgacccccggcgag
aagctgctcggtctcgacctcgcgcacggcggccacctcacgcacggcatgaagctcaac
ttctccggcaagctgtacgacgtcgcgtcctacggggtcagcaaggacgaccaccgcatc
gacatggacgaggtccgcgacatcgcgctgcgcgagaagccgaaggtcatcgtcgccggc
tggtccgcctacccgcgccacgaggacttcgccgccttccgctccatcgccgacgaggtc
ggtgcctacctgtgggtcgacatggcgcacttcgccggtctggtcgccgcaggcctgcac
ccgtcgccggtgccctacgccgacgtcgtctccaccaccgtgcacaagaccctcggtggc
ccgcgttccggcctgatcctcgccaagcaggaatgggcgaagaagatcaactcggccgtc
ttccccggtcagcagggcggaccgctcatgcacgcgatcgccgcgaaggccgtcgcgctg
aagatcgccgcgagcgacgagttcaaggaccgccagcggcgcaccctctccggtgcccgg
atcatcgccgaccgcctgtcgcagtccgacgtcgccgacaagggcatctcggtgctcacc
ggtggcaccgacgtgcacctggtcctggtcgacctgcgcaactcgcagctcgacggccag
cagggtgaggacgccctccacgaggtcggcatcaccgtcaaccgcaacgccgtgccgttc
gatccgcgtcccccgatggtcacctcgggcctgcgcatcggcaccccggcgctcgcgacc
cgcggtttcggcgacgagcagttcaccgaggtcgccgagatcatcgcgcagacgctcgtc
ggtggcgccgacgccgagtcgctgcggacccgcgtgagcgccctggcacagtccgtgccg
ctgtacgagggcctcgaggactggcgtctgatctga
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