Rhodococcus pyridinivorans SB3094: Y013_21945
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Entry
Y013_21945 CDS
T02974
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rpy
Rhodococcus pyridinivorans SB3094
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpy03400
]
Y013_21945
DNA repair and recombination proteins [BR:
rpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Y013_21945
Archaeal homologous recombinant proteins
Y013_21945
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Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
DNA_pol3_theta
Motif
Other DBs
NCBI-ProteinID:
AHD23100
UniProt:
V9XM95
LinkDB
All DBs
Position
4653947..4655125
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AA seq
392 aa
AA seq
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MRILHTSDWHIGRTFHGVDLLADQARALRAIADLVAERRIDVVVVPGDVYDRSIPSSDAV
AVCNAGLEAIREAGAIIVATSGNHDSPVRLGAGAAFAAHGGLHLITRVSQIDSPVVLHDE
HGPVRFYGIPYLEPEITRAELGVPEARSHQQILDAAMERVRADVADRHGRTVVLAHAFVV
GGEPSDSERSISVGGVETVAASSFDGVDYVALGHLHSPQTVSETVRYSGSPLPYSFGERS
HRKAVFVVDLDASGAASVERVDLPVIRELTRLEGELDDLLADPAHAAVEEHYVSAVLTDA
IRPLDAMRRLQERFPYAVHVEWQRPAGSTVGSYRDKVRGRSDRDIAASFLTDVRSEPSER
ERGWIDEALREVDRRRGIGDETDTQWRTDVPA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcctgcacacctccgactggcacatcggccgcaccttccacggtgtcgacctg
ctcgccgaccaggcgcgtgcgctgcgggccatcgccgatctggtggccgaacgccggatc
gacgtggtggtcgtgccgggcgacgtgtacgaccggtcgatcccgagttccgacgcggtc
gccgtgtgcaacgccggcctcgaggccatccgtgaggcaggggcgatcatcgtcgccacc
tccggcaaccacgactcgccggtccggctcggtgccggcgctgccttcgccgcgcacggg
ggtctgcacctgatcacccgcgtatctcagatcgacagccctgtcgtcctgcacgacgag
cacggcccggtccgcttctacggcatcccgtatctcgaacccgagatcacccgcgccgag
ctcggcgtgcccgaggcccgttcgcaccagcagatcctcgacgcggcgatggaacgcgtg
cgcgccgatgtcgcggatcggcacggccgcacggtcgtcctggcgcacgccttcgtcgtc
ggtggcgagcccagcgactccgagcggtccatctccgtcggcggggtcgagacggtcgcc
gcgtcgtcgttcgacggtgtcgactacgtcgcgctcggtcacctgcattccccgcagacg
gtgagcgagacggtccggtactcgggatcgccgttgccgtactccttcggcgagcgctcg
caccgcaaggcggtcttcgtcgtcgacctcgacgcctcgggtgcggcgtccgtcgagcgg
gtcgatctcccggtgatccgcgaattgactcgtctcgaaggcgaactggacgatctgctc
gccgatccggcgcatgccgccgtcgaggagcactacgtctccgcggtgctgaccgacgcg
atccgcccgctcgacgccatgcgtcgcctgcaggagcggttcccgtacgccgtgcacgtc
gaatggcagcggccggccgggtccacggtgggcagctaccgcgacaaggtgcgcgggcgc
agtgatcgcgacatcgccgcgtcgttcctcaccgatgtgcgttccgagccgtccgaacgc
gagcgcggctggatcgacgaagcgttgagggaggtcgaccgtcgtcgtggcatcggcgac
gagaccgacacgcaatggcggacggacgtgccggcatga
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